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Table 2 Fold-change expression values of the R. tropici CIAT 899 nod genes on the RNA-seq analysis. Fold-change values followed by an asterisk (*) are significantly over-expressed

From: RNA-seq analysis of the Rhizobium tropici CIAT 899 transcriptome shows similarities in the activation patterns of symbiotic genes in the presence of apigenin and salt

Gene name/Locus tag

Apigenin

Salt

nodD1/RTCIAT899_PB01295

1.23

1.04

nodD2/RTCIAT899_PB01070

−1.25

3.01

nodD3/RTCIAT899_PB00640

−1.21

2.1

nodD4/RTCIAT899_PB01560

1.09

1.16

nodD5/RTCIAT899_PB00560

−1.12

−1.09

nodA1/RTCIAT899_PB01300

8.73*

13.66*

nodB/RTCIAT899_PB01305

11.4*

19.01*

nodC/RTCIAT899_PB01310

6.69*

12*

nodS/RTCIAT899_PB01315

7.53*

12.89*

nodU/RTCIAT899_PB01320

5.39*

10.18*

nodI/RTCIAT899_PB01325

6.59*

12.48*

nodJ/RTCIAT899_PB01330

4.98*

10.15*

nodH/RTCIAT899_PB01340

3.09

7.6*

nodP/RTCIAT899_PB01345

2.78

6.08*

nodQ1/RTCIAT899_PB01350

3.25

6.39*

nodQ2/RTCIAT899_PB01355

1.28

2.54

nodA2/RTCIAT899_PB01095

10.3*

9.81*

hsnT/RTCIAT899_PB01100

7.27*

5.94*

nodF/RTCIAT899_PB01105

13.39*

13.43*

nodE/RTCIAT899_PB01110

10.37*

11.94*

nodA3/RTCIAT899_PB00645

1.15

3.36

nodM/RTCIAT899_PB02710

2.43

5.85*

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BMC Genomics

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