Skip to main content

Table 2 Fold-change expression values of the R. tropici CIAT 899 nod genes on the RNA-seq analysis. Fold-change values followed by an asterisk (*) are significantly over-expressed

From: RNA-seq analysis of the Rhizobium tropici CIAT 899 transcriptome shows similarities in the activation patterns of symbiotic genes in the presence of apigenin and salt

Gene name/Locus tag Apigenin Salt
nodD1/RTCIAT899_PB01295 1.23 1.04
nodD2/RTCIAT899_PB01070 −1.25 3.01
nodD3/RTCIAT899_PB00640 −1.21 2.1
nodD4/RTCIAT899_PB01560 1.09 1.16
nodD5/RTCIAT899_PB00560 −1.12 −1.09
nodA1/RTCIAT899_PB01300 8.73* 13.66*
nodB/RTCIAT899_PB01305 11.4* 19.01*
nodC/RTCIAT899_PB01310 6.69* 12*
nodS/RTCIAT899_PB01315 7.53* 12.89*
nodU/RTCIAT899_PB01320 5.39* 10.18*
nodI/RTCIAT899_PB01325 6.59* 12.48*
nodJ/RTCIAT899_PB01330 4.98* 10.15*
nodH/RTCIAT899_PB01340 3.09 7.6*
nodP/RTCIAT899_PB01345 2.78 6.08*
nodQ1/RTCIAT899_PB01350 3.25 6.39*
nodQ2/RTCIAT899_PB01355 1.28 2.54
nodA2/RTCIAT899_PB01095 10.3* 9.81*
hsnT/RTCIAT899_PB01100 7.27* 5.94*
nodF/RTCIAT899_PB01105 13.39* 13.43*
nodE/RTCIAT899_PB01110 10.37* 11.94*
nodA3/RTCIAT899_PB00645 1.15 3.36
nodM/RTCIAT899_PB02710 2.43 5.85*