Table 6 Annotation of differentially expressed genes encoding secreted proteins
Total (Annotated + Non-annotated) | Non-annotated | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
Total | Secreted | SSP | SSP-CR | Membrane | Total | Secreted | SSP | SSP-CR | Membrane | |
TOTAL GENOME | 12,006 | 1650 13.7 %a | 687 5.7 %a | 251 2.1 %a | 1689 14.1 %a | NA | NA | NA | NA | NA |
WTAP_WTBT_up | 293 | 84 28.7 %a | 43 14.7 %a | 18 6.1 %a | 70 23.9 %a | 129 44 %b | 43 51.2 %b | 30 69.8 %b | 13 72.2 %b | 30 42.9 %b |
WTAP_WTBT_dn | 467 | 189 40.1 % | 62 13.3 % | 21 4.5 % | 103 22.1 % | 140 30 % | 55 29.1 % | 33 53.2 % | 14 66.7 % | 28 27.2 % |
WTBT_WTNT_up | 312 | 121 38.8 % | 62 19.9 % | 31 9.9 % | 64 20.5 % | 161 51.6 % | 67 55.4 % | 48 77.4 % | 25 80.6 % | 32 50 % |
WTBT_WTNT_dn | 680 | 208 30.6 % | 74 10.9 % | 23 3.4 % | 127 18.7 % | 241 35.4 % | 53 25.5 % | 32 43.2 % | 14 60.9 % | 36 28.3 % |
MTAP_MTBT_dn | 20 | 10 50 % | 4 20 % | 1 5 % | 1 5 % | 5 25 % | 0 | 0 | 0 | 1 100 % |
WTAP_MTAP_up | 74 | 28 37.8 % | 17 23 % | 9 12.2 % | 10 13.5 % | 43 58.1 % | 16 57.1 % | 13 76.5 % | 7 77.8 % | 5 50 % |
WTAP_MTAP_dn | 144 | 27 18.8 % | 7 4.9 % | 1 0.7 % | 17 11.8 % | 58 40.3 % | 11 40.7 % | 6 85.7 % | 1 100 % | 5 29.4 % |
WTBT_MTBT_up | 192 | 98 51 % | 29 15.1 % | 12 6.3 % | 44 22.9 % | 64 33.3 % | 32 32.7 % | 18 62.1 % | 9 75 % | 7 15.9 % |
WTBT_MTBT_dn | 522 | 116 22.2 % | 43 8.2 % | 12 2.3 % | 111 21.3 % | 290 55.6 % | 62 53.4 % | 33 76.7 % | 11 91.7 % | 64 57.7 % |
TOTAL | 2704 | 881 32.6 % | 341 12.6 % | 128 4.7 % | 547 20.2 % | 1131 41.8 % | 339 38.5 % | 213 62.5 % | 94 73.4 % | 208 38 % |