A) Up-stream sequence interval [bp] | B) Motifs | C) Presence/ absence statistic | D) Mapping orientation statistic, D1/D2/D3 | E) Orientation and presence/ absence effect (% of C) | F) Set E with PE-filter | G) Motifs matching criteria E) and, indicated by (*), F) |
---|---|---|---|---|---|---|
−500, −1 | 264 | 112 (42.4 %) | 39 (14.7 %)#/ 27 (10.2 %)/ 16 (6.1 %) | 7 (6.2 % of 112) | 6 | M0007_1.01*, M0252_1.01*, M0576_1.01, M1180_1.01*, ABRE-like_binding_site_motif*, ACGTABREMOTIFA2OSEM*,, GADOWNAT* |
−250, −1 | 264 | 135 (51.1 %) | 65 (24.6 %)/ 32 (12.1 %)/ NA | 13 (9.6 % of 135) | NA | M0007_1.01, M0023_1.01, M0036_1.01, M0078_1.01, M0264_1.01, M0516_1.01, M0576_1.01, M0578_1.01, M0770_1.01, M1180_1.01, ACGTABREMOTIFA2OSEM, Box_II_promoter_motif, LEAFYATAG |
−100, −1 | 247 | 140 (56.7 %) | 57 (23.1 %)#/ 23 (9.3 %)/ NA | 11 (7.8 % of 140) | NA | M0014_1.01, M0016_1.01, M0019_1.01, M0031_1.01, M0078_1.01, M0081_1.01, M1180_1.01, Bellringer/replumless/ pennywise_BS1_IN_AG, Box_II_promoter motif, LTRECOREATCOR15, MYB_binding_site motif |
−500, −51 | 260 | 100 (38.4 %) | 28 (10.8 %)/ 18 (6.9 %) / NA | 5 (5 % of 100) | NA | M0007_1.01, M0252_1.01, ACGTABREMOTIFA2OSEM, GADOWNAT, GAREAT |
Core promoter motifs | ||||||
−50, −1 | 10 | 6 (60 %) | 5 (50 %) / 1 (TATA-box, 10 %) / NA | 0 (0 % of 4) | NA | No significant motifs according to filter criteria E detected |