Categories | # of SNPs | % of SNPs | Sequencing coverage | Density of SNP (per Kb) |
---|---|---|---|---|
Intergenic | 376,955 | 30.97 | 33,640,807 | 11.21 |
5′-UTR | 32,099 | 2.64 | 4,011,958 | 8.00 |
CDS (synonymous) | 121,477 | 9.98 | 22,691,151 | 7.36 |
CDS (non-synonymous) | 45,577 | 3.74 | ||
Intron | 578,685 | 47.54 | 51,989,650 | 11.13 |
3′-UTR | 50,850 | 4.18 | 6,599,093 | 7.71 |
ncRNA | 11,599 | 0.95 | 1,138,125 | 10.19 |
Total: | 1,217,242 | 100.00 | 120,070,784 | 10.14 |