Skip to main content

Advertisement

Table 1 Summary of the COG affiliation for the under-expressed and overexpressed boxes in each condition

From: Transcriptional profiling of Klebsiella pneumoniae defines signatures for planktonic, sessile and biofilm-dispersed cells

Condition Cluster containing under-expressed box Cluster containing overexpressed box COG affiliation a
Exponential planktonic 5 and 8   Amino acid transport and metabolism - Energy production and conversion
  1 and 6 Inorganic ion transport and metabolism - Function unknown
Stationary planktonic 9   Amino acid transport and metabolism - Function unknown
  7 and 10 Carbohydrate transport and metabolism - Function unknown
   8 Energy production and conversion - Amino acid transport and metabolism
7 h-old biofilm   5 Energy production and conversion Amino acid transport and metabolism
   9 Function unknown  
13 h-old biofilm   3 Carbohydrate transport and metabolism - Function unknown
Biofilm-dispersed   2 Translation, ribosomal structure and biogenesis Function unknown
  4 Amino acid transport and metabolism  
  1. aOnly the two most representative COG affiliations of each cluster were displayed