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Table 1 Number and position of GGNVS element in the promoter region of eight C4-3 soybean MATE genesa

From: Genome-wide analysis of MATE transporters and expression patterns of a subgroup of MATE genes in response to aluminum toxicity in soybean

Genes

No. of GGNVS

Position of GGNVSb

GmMATE13

7

-639,-943,-944,-1149,-1150,-1398,-1451

GmMATE47

12

-232,-541,-548,-670,-769,-834,-1026,-1043,-1044,-1183,-1417,-1457

GmMATE58

5

-42,-122,-133,-1447,-1481

GmMATE74

7

-85,-287,-768,-1210,-1354,-1386,-1390

GmMATE75

12

-383,-609,-611,-612,-616,-884,-885,-1002,-1003,-1015,-1351,-1449

GmMATE79

15

-139,-143,-144,-260,-489,-513,-560,-590,-637,-724,-725,-990,-1139,-1283,-1446

GmMATE84

9

-271,-772,-893,-1150,-1177,-1287,-1443,-1444,-1445,

GmMATE87

11

-141,-376,-515,-516,-636,-671,-813,-1010,-1162,-1235,-1491

  1. aGGNVS is the abbreviation for GGN(T/g/a/C)V(C/A/g)S(C/G), a cis-acting element (target DNA-binding sequence) of ART1 (Al Resistance Transcription Factor 1)
  2. bThe position is relative to the start codon of each gene
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BMC Genomics

ISSN: 1471-2164

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