Association analysis for disease resistance to Fusarium oxysporum in cape gooseberry (Physalis peruviana L)

Table 4 Summary of the linkage disequilibrium analysis for this study

Species	SNPs without LD filter	Total comparisons	Mean r² value	Comparisons in LD	Comparisons (p ≤ 0.01)
Cape gooseberry	60,663	1,388,575	0.040	1,316,228	54,612
Tomato	9,136	452,076	0.044	429,592	21,536
Potato	9,067	455,526	0.041	430,859	20,962