Skip to main content

Table 5 Summary of association analysis for the severity variable

From: Association analysis for disease resistance to Fusarium oxysporum in cape gooseberry (Physalis peruviana L)

Species SNP Gene where SNP is located Chromosome Position MAF Before Box-cox transformation After Box-cox transformation
       p-value FDR Adjusted p-value FDR Adjusted
        p-value   p-value
Tomato S8_62073300a Solyc08g081990.2 8 62,073,300 0.4643 0.0016 0.7129 0.0020 0.7631
S12_46594754 Solyc12g049500.1 12 46,594,754 0.0408 0.0021 0.7129 0.0034 0.7631
S5_61444687 Solyc05g051900.2 5 61,444,687 0.2347 0.0028 0.7129 0.0035 0.7631
S2_42554381 Solyc02g084920.2 2 42,554,381 0.2143 0.0036 0.7129 0.0037 0.7631
S2_42554396 42,554,396 0.2143 0.0036 0.7129 0.0037 0.7631
S2_42554398 42,554,398 0.2143 0.0036 0.7129 0.0037 0.7631
S5_63359509 Solyc05g054260.2 5 63,359,509 0.0663 0.0024 0.7129 0.0041 0.7631
S7_869940 Solyc07g006030.2 7 869,940 0.4694 0.0048 0.7129 0.0046 0.7631
S7_869967 869,967 0.4694 0.0048 0.7129 0.0046 0.7631
S9_65753970 Solyc09g091070.1 9 65,753,970 0.2347 0.0051 0.7129 0.0052 0.7631
S2_14016967 Solyc02g021620.2 2 14,016,967 0.0867 0.0039 0.7129 0.0053 0.7631
Potato S5_1237068 PGSC0003DMG400007522 5 1,237,068 0.0455 0.0008 0.8937 0.0023 0.9484
S5_58756015 PGSC0003DMG400023316 58,756,015 0.0657 0.0012 0.8937 0.0027 0.9484
S8_42535013 PGSC0003DMG400005498 8 42,535,013 0.4646 0.0021 0.8937 0.0029 0.9484
S8_42534983 42,534,983 0.4646 0.0021 0.8937 0.0029 0.9484
S9_49247242 PGSC0003DMG400037435 9 49,247,242 0.2323 0.0052 0.9096 0.0049 0.9484
S9_49247281 49,247,281 0.2323 0.0052 0.9096 0.0049 0.9484
  1. aSignificant associated SNP marker showed for severity and AUDPC analyses