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Table 6 Summary of association analysis for the AUDPC variable

From: Association analysis for disease resistance to Fusarium oxysporum in cape gooseberry (Physalis peruviana L)

Species SNP Gene where SNP is located Chromosome Position MAF Before box-cox transformation After box-cox transformation
       p-value FDR adjusted p-value FDR adjusted
        p-value   p-value
Tomato S9_65685191 Solyc09g090940.2 9 65,685,191 0.4898 0.0011 0.9616 0.0015 0.9977
S12_35821264 Solyc12g038490.1 12 35,821,264 0.4541 0.0059 0.9616 0.0024 0.9977
S8_62073300a Solyc08g081990.2 8 62,073,300 0.4643 0.0096 0.9616 0.0058 0.9977
S8_45545340 Solyc08g061260.2 8 45,545,340 0.3878 0.0101 0.9616 0.0079 0.9977
S9_67526887 Solyc09g098450.2 9 67,526,887 0.3929 0.0066 0.9616 0.0090 0.9977
S11_51389456 Solyc11g069690.1 11 51,389,456 0.0561 0.0056 0.9616 0.0097 0.9977
Potato S9_49077916 PGSC0003DMG400046263 9 49,077,916 0.4899 0.0011 0.9493 0.0015 0.9498
S12_35550547 Not near know genes 12 35,550,547 0.4546 0.0063 0.9493 0.0026 0.9498
S3_37927302 3 37,927,302 0.3030 0.0058 0.9493 0.0032 0.9498
S8_42535013 PGSC0003DMG400005498 8 42,535,013 0.4647 0.0091 0.9493 0.0055 0.9498
S8_42534983 8 42,534,983 0.4647 0.0091 0.9493 0.0055 0.9498
S2_52227231 PGSC0003DMG400042623 2 52,227,231 0.0202 0.0028 0.9493 0.0056 0.9498
  1. aSignificant associated SNP marker showed for severity and AUDPC analyses