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Table 3 Pips identified by genome in silico analysis

From: Analysis of the interactome of the Ser/Thr Protein Phosphatase type 1 in Plasmodium falciparum

PlasmoDB Accession numbera

Namea

RVxFext motifsb

PF3D7_0204600

conserved Plasmodium protein, unknown function

RKSVRW

PF3D7_0214400

conserved Plasmodium protein, unknown function

KKKVTF

PF3D7_0220000c

liver stage antigen 3 (LSA3)

KKKVRF

PF3D7_0304300

conserved Plasmodium protein, unknown function

KKKVTF

PF3D7_0305500

conserved Plasmodium protein, unknown function

KRNVSF/KRSVHF

PF3D7_0323300

conserved protein, unknown function

KKSVSF

PF3D7_0404700

dipeptidyl aminopeptidase 3 (DPAP3)

RKNVTF

PF3D7_0407300

transcription factor, putative

KKKVHF

PF3D7_0407700c

conserved Plasmodium protein, unknown function

KKKVSW

PF3D7_0416900

conserved Plasmodium protein, unknown function

KRNVHF

PF3D7_0503000

50S ribosomal protein L28, apicoplast, putative

RKNVRF

PF3D7_0513600

deoxyribodipyrimidine photo-lyase, putative

KKQVSF

PF3D7_0526500

conserved Plasmodium protein, unknown function

KKCVHF

PF3D7_0526600

conserved Plasmodium protein, unknown function

KKKVTF

PF3D7_0610100c

pre-mRNA-splicing factor SLU7, putative (SLU7)

KKKVNF

PF3D7_0628100

HECT-domain (ubiquitin-transferase), putative

RKSVKF/KKSVTF

PF3D7_0713900

conserved Plasmodium protein, unknown function

KKNVNF

PF3D7_0717800

conserved Plasmodium protein, unknown function

KRSVSW

PF3D7_0723800

conserved Plasmodium protein, unknown function

KKSVQF

PF3D7_0727500

conserved Plasmodium protein, unknown function

KKCVSF

PF3D7_0804500

conserved Plasmodium membrane protein, unknown function

KKNVHF

PF3D7_0913600

conserved Plasmodium protein, unknown function

KKMVHF

PF3D7_0917500

conserved Plasmodium protein, unknown function

RKAVQF

PF3D7_0919900c

regulator of chromosome condensation, putative

KKSVSF

PF3D7_0922800

conserved Plasmodium protein, unknown function

KKNVCF

PF3D7_0930100

conserved Plasmodium protein, unknown function

KKTVHF

PF3D7_1002900

conserved Plasmodium protein, unknown function

KRNVNF

PF3D7_1003700

conserved Plasmodium protein, unknown function

KRKVKF

PF3D7_1008100c

conserved Plasmodium protein, unknown function

RKSVSF

PF3D7_1020600

conserved Plasmodium membrane protein, unknown function

KKKVNW

PF3D7_1022200

conserved Plasmodium membrane protein, unknown function

KKVVRF

PF3D7_1029400

conserved Plasmodium protein, unknown function

KKNVSF

PF3D7_1031600c

conserved Plasmodium protein, unknown function (GEXP15)

KKKVQF

PF3D7_1107700

pescadillo-like protein (PES)

KKKVTW

PF3D7_1106800

protein kinase, putative

KKKVSF

PF3D7_1109100

conserved Plasmodium protein, unknown function

RRKVSF

PF3D7_1113700

glyoxalase I (GloI)

KKNVKF

PF3D7_1128000.1

conserved Plasmodium protein, unknown function

KKNVTF

PF3D7_1139700

adrenodoxin reductase, putative

RKKVHF

PF3D7_1200100

erythrocyte membrane protein 1, PfEMP1 (VAR)

RKTVRF

PF3D7_1202600c

conserved protein, unknown function

KKNVTF/KKQVTF/KRTVSF/KKSVSF/KKTVSF/KKSVSF/KKNVSF

PF3D7_1220100

pre-mRNA splicing factor, putative

KKMVNF

PF3D7_1234700

CPW-WPC family protein

KKSVSF

PF3D7_1238500

conserved Plasmodium protein, unknown function

KKKVHF

PF3D7_1244200

transcription factor Tfb2, putative

RKSVHF

PF3D7_1244500

conserved Plasmodium protein, unknown function

RRKVNF

PF3D7_1322100

variant-silencing SET protein (SETvs)

KRNVSF

PF3D7_1364300

pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (PRP16)

RKMVQF

PF3D7_1366300

conserved Plasmodium protein, unknown function

KKVVKF/KKKVQF

PF3D7_1367500

NADH-cytochrome b5 reductase, putative

KKHVHF

PF3D7_1406200

conserved Plasmodium protein, unknown function

KKMVSF

PF3D7_1411500

conserved Plasmodium protein, unknown function

KKQVSF/KKKVSF

PF3D7_1413000

conserved Plasmodium protein, unknown function

KKNVQF

PF3D7_1417300

cysteine protease ATG4, putative (ATG4)

KKKVRF

PF3D7_1460500c

conserved Plasmodium protein, unknown function

RKTVSF

  1. aAnnotations from PlasmoDB database (v24)
  2. bThe RVxFext binding motifs corresponding to the [KR][KR][ACHKMNQRSTV]V[CHKNQRST][FW] consensus sequence were indicated
  3. cShared proteins isolated by Y2H and in silico screenings