De novo transcriptomic assembly and profiling of Rigidoporus microporus during saprotrophic growth on rubber wood

Table 5 Number of Unigenes expressed and encoding enzymes involved in fatty acid and rubber latex degradation

Pathway	Gene name	No. of unigenes
Fatty acid biosynthesis	Acetyl-CoA/propionyl-CoA carboxylase	1
	Acetyl-CoA carboxylase, biotin carboxylase subunit	1
	Fatty acid synthase subunit beta, fungi type	1
	Fatty acid synthase subunit alpha, fungi type	3
	3-oxoacyl-[acyl-carrier protein] reductase	16
Fatty acid elongation	3-hydroxyacyl-CoA dehydrogenase	2
	Enoyl-CoA hydratase	1
	Palmitoyl-protein thioesterase	1
Fatty acid degradation	Long-chain acyl-CoA synthetase	11
	Acyl-CoA oxidase	1
	Enoyl-CoA hydratase	1
	3-hydroxyacyl-CoA dehydrogenase	2
	Acetyl-CoA C-acetyltransferase	4
	Alcohol dehydrogenase 1/7	5
	Aldehyde dehydrogenase (NAD+)	6
	Unspecific monooxygenase	11
Rubber tree latex degradation	Acyl-CoA synthetase	11
	Acyl-CoA dehydrogenase	3
	Enoyl-CoA hydratase	10
	3-hydroxyacyl-CoA dehydrogenase	7
	Acyl-CoA acetyltransferase	8

Unigenes for fatty acid pathways were identified using KEGG pathway enrichment analysis while that of rubber tree latex was compiled manually from the transcriptome data. Rubber tree latex degradation pathway as proposed by Hiessl et al. [49]. Fatty acid biosynthesis/elongation/degradation (FDR < 0.001 and log2FC > 1) and rubber latex degradation (FDR < 0.05 and log2FC > 0.5)

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