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Table 2 Co-expressed genes from EPIG-Seq analysis of the MOA RNA-Seq data

From: EPIG-Seq: extracting patterns and identifying co-expressed genes from RNA-Seq data

Pattern # Genebank Acc. # Symbol Description
1 NM_001040019 Acaa1b Acetyl-Coenzyme A acyltransferase 1B
1 NM_001108181 Acad11 Acyl-CoA dehydrogenase family, member 11
1 NM_001137643 Gstt3 Glutathione S-transferase, theta 3
1 NM_012600 Me1 Malic enzyme 1, NADP(+)-dependent, cytosolic
1 NM_017321 Aco1 Aconitase 1, soluble
1 NM_031559 Cpt1a Carnitine palmitoyltransferase 1a, liver
1 NM_057197 Decr1 2,4-dienoyl CoA reductase 1, mitochondrial
1 NM_130826 Hadha Hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit
1 NM_175837 Cyp4a1 Cytochrome P450, family 4, subfamily a, polypeptide 1
2 NM_001004086 Pon3 Paraoxonase 3
2 NM_001025720 Dhtkd1 Dehydrogenase E1 and transketolase domain containing 1
2 NM_001037180 Fkbp8 FK506 binding protein 8
2 NM_001105965 Dpt Dermatopontin
2 NM_001109604 Tmem86b Transmembrane protein 86B
2 NM_053995 Bdh1 3-hydroxybutyrate dehydrogenase, type 1
2 NM_139102 Dmgdh Dimethylglycine dehydrogenase
2 XM_002728268 NA NA
2 XM_002728512 NA NA
2 XM_002728876 NA NA
3 NM_001004271 Ugt2b15 UDP glucuronosyltransferase 2 family, polypeptide B15
3 NM_001007701 Tram1 Translocation associated membrane protein 1
3 NM_001013110 Tf Transferrin
3 NM_001033868 Surf4 Surfeit 4
3 NM_012738 Apoa1 Apolipoprotein A-I
3 NM_012998 P4hb Prolyl 4-hydroxylase, beta polypeptide
3 NM_017013 Gsta2 Glutathione S-transferase alpha 2
3 NM_021766 Pgrmc1 Progesterone receptor membrane component 1
3 NM_138547 Akr1c14 Aldo-keto reductase family 1, member C14
3 NM_175843 NA NA
4 NM_022521 Oat Ornithine aminotransferase
4 NM_031332 Slc22a8 Solute carrier family 22 (organic anion transporter), member 8
4 NM_134382 Elovl5 ELOVL fatty acid elongase 5
4 NM_173305 Hsd17b6 Hydroxysteroid (17-beta) dehydrogenase 6