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Table 5 Agreement of clusters extracted from the TCGA breast cancer sampled data

From: EPIG-Seq: extracting patterns and identifying co-expressed genes from RNA-Seq data

Samples compared Agreement
1 vs 2 0.770
1 vs 3 0.524
1 vs 4 0.452
2 vs 3 0.691
2 vs 4 0.751
3 vs 4 0.500
  1. All comparisons based on AMI except for those with sample 2 where concordance was used
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BMC Genomics

ISSN: 1471-2164

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