Fig. 5
From: The impact and origin of copy number variations in the Oryza species
Formation mechanisms of non-co-linear CNV genes inferred by signature of breakpoint. a By comparison to the ancestral gene Os01g10210, Mutator-like elements flanked both sides of Os12g34770, implying that this duplication event was possibly mediated by TE activity. b Micro-homology at breakpoints between Os06g40650 and Os06g40609 indicated this duplication was mediated by NHEJ (non-homologous end joining) during DSB repair process. c High homology at breakpoint between Os11g17120 and Os11g17330 indicated the role of NAHR (non-allelic homologous recombination). Black boxes, genes; green boxes, Mutator-like elements; red characters, homologous sequences between the non-co-linear gene and its ancestral copy