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Table 1 Whole genome assembly features of S. oryzae

From: De novo genome assembly and annotation of rice sheath rot fungus Sarocladium oryzae reveals genes involved in Helvolic acid and Cerulenin biosynthesis pathways

A. Assembly parameters

Value

 Total genome size (bp)

32,778,109

 Number of contigs

5856

 Maximum contig length (bp)

89796

 Minimum contig length (bp)

209

 Average contig length (bp)

5597

 Total number of non-ATGC characters

0

 Depth of genome coverage (x)

82

 N50 value (bp)

18070

 GC (%)

53.49

B. Protein annotation

 

 Total number of proteins/genes predicted

10526

 Total number of annotated proteins/genes

9658

 Total number of un-annotated proteins/genes

868