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Table 4 Differentially expressed genes within the interval between SWU2302 and HAU2119

From: Fine mapping and RNA-Seq unravels candidate genes for a major QTL controlling multiple fiber quality traits at the T1 region in upland cotton

Gene ID

FPKM

log2FC_0

log2FC_5

Gene annotation

R118_0

Yumian1_0

R118_5

Yumian1_5

Gorai.010G174800

298.9

110.3

2083.4

74.0

1.4

4.8

AL7B4

Gorai.010G177300

1.49

19.9

4.1

24.5

−3.8

−2.6

XTH_8

Gorai.010G180100

68.6

152.4

69.0

138.2

−1.2

−1.0

UGPI6

Gorai.010G181500

42.1

106.80

49.6

106.2

−1.3

−1.1

GCST

  1. FPKM fragments per kilo base of exon per million fragments mapped, FC fold changes