mInDel: a high-throughput and efficient pipeline for genome-wide InDel marker development

BMC Genomics

Table 3 Summary of InDel markers developed from two experiments

Types	Mo17 vs. B73 (with reference genome)	Zheng58 vs. Qi319 (without reference genome)
Total InDels	739,250	223,084
Mean size	71 bp	66 bp
1 ~ 10 bp	76,376	25,144
11 ~ 20 bp	63,714	21,291
21 ~ 100 bp	374,847	123,788
>100 bp	213,698	52,861
Discovery accuracy	86.8 % (276 out of 318)	72.6 % (437 out of 602)

ISSN: 1471-2164