Table 1 The summary of the sequencing and assembly
Samples | NHCC |
|---|---|
 Total raw reads | 857,423,614 |
 Total clean reads | 790,269,418 |
 Total clean nucleotides (nt) | 71,124,247,620 |
 Q20 percentage | 98.05 % |
 N percentage | 0.00 % |
 GC percentage | 47.30 % |
Contig | Â |
 Total number | 1,596,012 |
 Total length (nt) | 542,865,388 |
 Mean length (nt) | 343 |
 N50 | 593 |
Unigene | Â |
 Total number | 136,189 |
 Total length (nt) | 153,124,745 |
 Mean length (nt) | 1124 |
 N50 | 1705 |
 Total consensus sequences | 136,189 |
 Distinct clusters | 73,514 |
 Distinct singletons | 62,675 |