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Fig. 1 | BMC Genomics

Fig. 1

From: Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system

Fig. 1

Using Phylogenetic Profiler to Find Gene Annotations and Missing Genes. From the Find Genes menu item, a user can select Phylogenetic Profilers: Single Genes submenu (Fig. 1 (i)) to start investigating genes in a selected candidate genome with or without homologs in other closely related genomes (Fig. 1 (ii)). While the “With Homologs” option is useful for additional MyIMG gene annotations, the “Without Homologs” option provides a list of potential missing genes for further investigation (Fig. 1 (iii)). To investigate a potential missing gene, the user first selects the gene and then clicks on the “Missing Gene?” button (Fig. 1 (iii)). Potential missing genes identified by TBlastn search will be displayed

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