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Fig. 4 | BMC Genomics

Fig. 4

From: Genomic analysis of the multi-host pathogen Erysipelothrix rhusiopathiae reveals extensive recombination as well as the existence of three generalist clades with wide geographic distribution

Fig. 4

Population structure of Erysipelothrix rhusiopathiae based on in silico chromosome painting. Tree and heat map illustrate the relatedness among E. rhusiopathiae isolates based on chromosome painting using ChromoPainter and model-based clustering using Bayesian Markov chain Monte Carlo (MCMC) analysis in fineSTRUCTURE. The color scale represents the number of ‘chunks’ shared between populations of donors (x-axis) and recipients (y-axis). Population subgroup assignment is shown in Figure S4 in Additional file 2. Arrows indicate isolates whose correct clade association is not resolved between the phylogenic and chromosome painting approaches

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