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Fig. 6 | BMC Genomics

Fig. 6

From: Genomic analysis of the multi-host pathogen Erysipelothrix rhusiopathiae reveals extensive recombination as well as the existence of three generalist clades with wide geographic distribution

Fig. 6

Relationship among Clade 3 isolates. This maximum likelihood tree (mid-point rooted) was generated using PhyML based on the curated set of single nucleotide polymorphisms (SNPs) found to be outside recombinant segments as determined using Gubbins. Bootstrap values with >70 % support are shown, in addition to support for clusters of isolates by PhyloPhlAn and fineSTRUCTURE

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BMC Genomics

ISSN: 1471-2164

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