Insights on the virulence of swine respiratory tract mycoplasmas through genome-scale metabolic modeling

BMC Genomics

Table 1 Selected species and strains, abbreviation, NCBI accession numbers and experimental availability of strains

Species	Strain	Accession number	Abbreviation	Pathogenicity level	Experimental availability ⋆^a	Reference
M. hyopneumoniae	168	NC_017509	MHP_168	Pathogenic	NA	[16]
	168L	CP003131	MHP_168L	Attenuated	NA	[19]
	232	AE017332	MHP_232	Pathogenic	NA	[13]
	7422	NC_021831	MHP_7422	Pathogenic	Brazil	[18]
	7448	AE017244	MHP_7448	Pathogenic	Brazil	[14]
	J	AE017243	MHP_J	Attenuated	Brazil and France	[14]
	All Strains	NA	MHP	NA	NA	NA
M. hyorhinis	HUB-1	NC_014448	MHR_HUB1	Pathogenic	NA	[15]
	GDL-1	NC_016829	MHR_GDL1	NA ⋆^b	NA	[17]
	SK-76	NC_019552	MHR_SK76	Pathogenic	NA	[20]
	ATCC 17981	ARTL0100000	MHR_17981	Attenuated	Brazil and France	NA ⋆^c
	All Strains	NA	MHR	NA	NA	NA
M. flocculare	ATCC 27399	CP007585	MFL_27399	Commensal	France	[21]
	ATCC 27716	AFCG01000000	MFL_27716	Commensal	Brazil	[18]
	All Strains	NA	MFL	NA	NA	NA

Notes:
NA: Not available
⋆^a: Strains available only in Brazil are protected strains which are property of the government and cannot be used outside authorised laboratories. Strains available in France were purchased from the ATCC repository; these strains were also available for testing in the laboratory in Brazil
⋆^b: M. hyorhinis strain GDL-1 was retrieved from a contaminated cell line and, to our knowledge it has never been reported neither as pathogenic nor as an attenuated strain
⋆^c: M. hyorhinis strain ATCC 17981 genome is available online but not published in any paper up to now. (source: http://genomeportal.jgi.doe.gov/Mychy1/Mychy1.info.html)

ISSN: 1471-2164