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Table 4 Differentially methylated CGIs in promoter, intragenic and intergenic regions

From: Gene and transposable element methylation in great tit (Parus major) brain and blood

CGIs

#

%

Differentially methylated

%

Brain hypermethylated

Brain hypomethylated

Associated genes

Total

33054

100.0

6877

20.8

4622

2255

3652

Promoter

9985

30.2

1186

11.9

748

438

1357

Intragenic

8954

27.1

2055

23.0

1246

809

2295

Intergenic

14820

44.8

3743

25.3

2677

1066

0

  1. We calculated the relative methylation levels for CGIs with at least three CpG sites, and determined differentially methylated CGIs using Fisher’s exact test. Table shows the number of differentially methylated CGIs and associated genes in blood and brain