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Table 3 DETs involved in hormone and secondary metabolism pathways in Citrus sinensis plants infected with CTV-B2, CTV-B6 and CaLas-B232

From: Transcriptome analysis of sweet orange trees infected with ‘Candidatus Liberibacter asiaticus’ and two strains of Citrus Tristeza Virus

Gene symbol

Log2 fold change (Gfold 0.01)

Citrus sinensis_ID

Arabidopsis thaliana_ID

E-value

CTV-B2

CTV-B6

CaLas-B232

Hormone metabolism

    

JMT

2.3

3.4

4.4

orange1.1g017514m

AT1G19640

4e-91

LOX2

0.6

0.7

4.0

orange1.1g002670m

AT3G45140

0

SRG1

1.6

0.0

0.0

orange1.1g040640m

AT1G17020

8e-60

SRG1

0.6

1.2

0.8

orange1.1g035879m

AT1G17020

9e-113

SRG1

0.6

0.3

1.1

orange1.1g045260m

AT1G17020

1e-119

ERF-1

0.0

1.6

2.1

orange1.1g028566m

AT4G17500

7e-36

ERF104

0.0

0.3

1.9

orange1.1g023209m

AT5G61600

4e-41

a(Gibberellin)

0.0

−1.6

−0.6

orange1.1g035431m

AT5G14920

3e-22

Secondary metabolism

    

2OG-Fe(II)

4.2

4.1

7.0

orange1.1g019027m

AT4G10490

4e-141

DMR6

1.9

2.8

3.5

orange1.1g019665m

AT5G24530

3e-139

2OG-Fe(II)

8.9

0.0

0.0

orange1.1g039524m

AT3G13610

1e-126

TPS21

8.2

0.0

0.0

orange1.1g041926m

AT5G23960

8e-111

TPS21

0.0

−1.1

0.0

orange1.1g010399m

AT5G23960

7e-75

TPS21

0.0

0.0

2.2

orange1.1g043754m

AT5G23960

2e-68

OMT1

2.1

0.0

0.1

orange1.1g017595m

AT5G54160

7e-93

OMT1

0.1

1.3

0.4

orange1.1g044458m

AT5G54160

6e-99

GGPS1

3.9

0.0

1.0

orange1.1g020845m

AT4G36810

5e-19

VTE2

2.7

0.0

0.0

orange1.1g029089m

AT2G18950

2e-41

VTE2

0.0

−1.5

−0.5

orange1.1g013845m

AT2G18950

2e-66

a(Terpenoidcycl)

7.2

0.0

0.0

orange1.1g044462m

AT3G25810

1e-97

LAC4

0.0

0.5

3.1

orange1.1g008799m

AT2G38080

0

LAC5

0.0

0.7

2.7

orange1.1g008066m

AT2G40370

0

LAC7

0.0

0.0

2.2

orange1.1g008366m

AT3G09220

0

UGT74B1

1.6

0.7

2.6

orange1.1g042896m

AT1G24100

4e-51

  1. aGenes without abbreviations
  2. DETs Differentially expressed transcripts