Skip to main content

Table 2 Genes involved in each process of cluster 5

From: Fungal and host transcriptome analysis of pH-regulated genes during colonization of apple fruits by Penicillium expansum

GO Term

Gene id

Genbank transcript id

Description

Regulation of pH

PEXP_046990

KGO39741

Sodium/calcium exchanger membrane region

 

PEXP_043720

KGO39291

Alkali metal cation/H+ antiporter Nha1, C-terminal

 

PEXP_009670

KGO49300

Cation/H+ exchanger

 

PEXP_095400

KGO43638

Sodium/calcium exchanger membrane region

L-Arabinose metabolic process

PEXP_023030

KGO42774

Glycoside hydrolase, superfamily

PEXP_071150

KGO40611

Alcohol dehydrogenase superfamily, zinc-type

PEXP_089320

KGO41720

Glycoside hydrolase, superfamily

Calcium ion transport

PEXP_046990

KGO39741

Sodium/calcium exchanger membrane region

 

PEXP_088420

KGO41618

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

 

PEXP_095400

KGO43638

Sodium/calcium exchanger membrane region

 

PEXP_050270

KGO42077

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

Kynurenine metabolic process

PEXP_039010

KGO48037

putative cyclase

PEXP_045070

KGO39237

putative cyclase

PEXP_009350

KGO49268

Pyridoxal phosphate-dependent transferase, major region, subdomain 2

Glyoxylate cycle

PEXP_011610

KGO49112

Malate synthase A

 

PEXP_077890

KGO37773

Pyruvate/Phosphoenolpyruvate kinase

Tryptophan catabolic process

PEXP_039010

KGO48037

Putative cyclase

PEXP_045070

KGO39237

Putative cyclase

PEXP_009350

KGO49268

Pyridoxal phosphate-dependent transferase, major region, subdomain 2

Inorganic ion transmembrane transport

PEXP_059490

KGO45335

Sulfate anion transporter

PEXP_043720

KGO39291

Alkali metal cation/H+ antiporter Nha1, C-terminal

PEXP_048620

KGO39686

Nickel/cobalt transporter, high-affinity

 

PEXP_009670

KGO49300

Cation/H+ exchanger

 

PEXP_088420

KGO41618

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

 

PEXP_095400

KGO43638

Sodium/calcium exchanger membrane region

 

PEXP_050270

KGO42077

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

 

PEXP_094650

KGO43563

Ammonium transporter

Disaccharide metabolic process

PEXP_052570

KGO42305

Glycosyl transferase, family 20

PEXP_011870

KGO49138

Pectinesterase, catalytic

PEXP_069330

KGO46763

Glycoside hydrolase, family 61

 

PEXP_011880

KGO49139

Glycoside hydrolase, family 28

 

PEXP_066270

KGO46936

Hexokinase, N-terminal

 

PEXP_053240

KGO42372

Glycoside hydrolase, family 61

 

PEXP_107940

KGO41788

Alpha-amylase, C-terminal all beta

Substrate-specific transmembrane transporter activity

PEXP_046990

KGO39741

Sodium/calcium exchanger membrane region

PEXP_059490

KGO45335

Sulfate anion transporter

PEXP_016910

KGO46049

Xanthine/uracil/vitamin C permease

 

PEXP_043720

KGO39291

Alkali metal cation/H+ antiporter Nha1, C-terminal

 

PEXP_052330

KGO42281

Major facilitator superfamily domain, general substrate transporter

 

PEXP_033600

KGO39977

Amino acid/polyamine transporter I

 

PEXP_094860

KGO43584

Major facilitator superfamily domain, general substrate transporter

 

PEXP_068270

KGO46657

Nucleobase cation symporter-1, NCS1

 

PEXP_006100

KGO36811

Major facilitator superfamily domain, general substrate transporter

 

PEXP_086200

KGO40808

Amino acid/polyamine transporter I

 

PEXP_003610

KGO37353

Major facilitator superfamily domain, general substrate transporter

 

PEXP_043410

KGO39260

Major facilitator superfamily domain, general substrate transporter

 

PEXP_048620

KGO39686

Nickel/cobalt transporter, high-affinity

 

PEXP_006360

KGO36837

Major facilitator superfamily domain, general substrate transporter

 

PEXP_000260

KGO44335

Amino acid/polyamine transporter I

 

PEXP_072400

KGO48510

Major facilitator superfamily domain, general substrate transporter

 

PEXP_009030

KGO48810

Na dependent nucleoside transporter

 

PEXP_068910

KGO46721

Major facilitator superfamily domain, general substrate transporter

 

PEXP_031270

KGO40312

Permease, cytosine/purine, uracil, thiamine, allantoin

 

PEXP_009670

KGO49300

Cation/H+ exchanger

 

PEXP_110420

KGO38764

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

 

PEXP_095790

KGO43677

Major facilitator superfamily domain, general substrate transporter

 

PEXP_048590

KGO39683

Amino acid/polyamine transporter I

 

PEXP_104220

KGO36561

Cation/H+ exchanger

 

PEXP_019490

KGO45826

C4-dicarboxylate transporter/malic acid transport protein

 

PEXP_088420

KGO41618

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

 

PEXP_076320

KGO37552

Major facilitator superfamily domain, general substrate transporter

 

PEXP_001370

KGO37112

Major facilitator superfamily domain, general substrate transporter

 

PEXP_084160

KGO41053

Amino acid/polyamine transporter I

 

PEXP_095400

KGO43638

Sodium/calcium exchanger membrane region

 

PEXP_050270

KGO42077

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

 

PEXP_062420

KGO45644

General substrate transporter

 

PEXP_022750

KGO42746

Major facilitator superfamily domain, general substrate transporter

 

PEXP_068690

KGO46699

Major facilitator superfamily domain, general substrate transporter

 

PEXP_034320

KGO40048

Arsenical pump membrane protein, ArsB

 

PEXP_074940

KGO36159

Major facilitator superfamily domain, general substrate transporter

 

PEXP_094650

KGO43563

Ammonium transporter

Solute:proton antiporter activity

PEXP_046990

KGO39741

Sodium/calcium exchanger membrane region

 

PEXP_043720

KGO39291

Alkali metal cation/H+ antiporter Nha1, C-terminal

 

PEXP_009670

KGO49300

Cation/H+ exchanger

 

PEXP_104220

KGO36561

Cation/H+ exchanger

 

PEXP_095400

KGO43638

Sodium/calcium exchanger membrane region

Cation:cation antiporter activity

PEXP_046990

KGO39741

Sodium/calcium exchanger membrane region

PEXP_043720

KGO39291

Alkali metal cation/H+ antiporter Nha1, C-terminal

 

PEXP_104220

KGO36561

Cation/H+ exchanger

 

PEXP_095400

KGO43638

Sodium/calcium exchanger membrane region

Metal ion binding

PEXP_046510

KGO39177

Cytochrome P450, E-class, CYP52

 

PEXP_036890

KGO35901

Transcription factor, fungi

 

PEXP_084560

KGO41093

4-Hydroxyphenylpyruvate dioxygenase

 

PEXP_055320

KGO44077

Polyketide synthase, enoylreductase

 

PEXP_042410

KGO39400

Manganese/iron superoxide dismutase, C-terminal

 

PEXP_072700

KGO48540

Annexin

 

PEXP_089160

KGO41704

Terpenoid synthase

 

PEXP_102680

KGO36423

Transcription factor, fungi

 

PEXP_042010

KGO48399

Protein of unknown function DUF3468

 

PEXP_011320

KGO49083

Zinc finger, C2H2

 

PEXP_095680

KGO43666

Protein of unknown function DUF3468

 

PEXP_050580

KGO42108

Cytochrome P450

 

PEXP_059140

KGO45293

Polyketide synthase, enoylreductase

 

PEXP_100050

KGO46448

Heavy metal-associated domain, HMA

 

PEXP_103630

KGO36296

Urease accessory protein UreD

 

PEXP_083550

KGO40992

Thiamine pyrophosphate enzyme, C-terminal TPP-binding

 

PEXP_070880

KGO40584

Polyketide synthase, enoylreductase

 

PEXP_027120

KGO42963

hypothetical protein

 

PEXP_040610

KGO48229

Transcription factor, fungi

 

PEXP_075350

KGO36016

Alpha-actinin

 

PEXP_011040

KGO49055

Cytochrome P450, E-class, group I

 

PEXP_005060

KGO36707

Transcription factor, fungi

 

PEXP_070870

KGO40583

Aldehyde dehydrogenase, C-terminal

 

PEXP_046450

KGO39171

Amidohydrolase 1

 

PEXP_008360

KGO37036

4-Hydroxyphenylpyruvate dioxygenase

 

PEXP_048620

KGO39686

Nickel/cobalt transporter, high-affinity

 

PEXP_101160

KGO38158

Pectin lyase fold/virulence factor

 

PEXP_022330

KGO42704

Transcription factor, fungi

 

PEXP_058230

KGO38945

Alcohol dehydrogenase superfamily, zinc-type

 

PEXP_053390

KGO42387

Polyketide synthase, enoylreductase

 

PEXP_017020

KGO46060

Cytochrome P450

 

PEXP_021500

KGO44639

Transcription factor, fungi

 

PEXP_043440

KGO39263

Polyketide synthase, enoylreductase

 

PEXP_102420

KGO36222

Protein of unknown function DUF3468

 

PEXP_108970

KGO41891

Polyketide synthase, enoylreductase

 

PEXP_095570

KGO43655

Transcription factor, fungi

 

PEXP_088350

KGO41611

Transcription factor, fungi

 

PEXP_056220

KGO38423

Cytochrome P450

 

PEXP_099120

KGO46300

Hypothetical protein

 

PEXP_028450

KGO43127

Transcription factor, fungi

 

PEXP_110420

KGO38764

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

 

PEXP_050400

KGO42090

Zinc finger, C2H2

 

PEXP_088420

KGO41618

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

 

PEXP_085230

KGO41160

Hypothetical protein

 

PEXP_000560

KGO44365

Class II aldolase/adducin N-terminal

 

PEXP_071150

KGO40611

Alcohol dehydrogenase superfamily, zinc-type

 

PEXP_090470

KGO45017

Pyruvate carboxyltransferase

 

PEXP_080790

KGO38063

hypothetical protein

 

PEXP_026670

KGO42918

Transcription factor, fungi

 

PEXP_084100

KGO41047

Transcription factor, fungi

 

PEXP_102160

KGO38273

Casein kinase II, regulatory subunit

 

PEXP_036970

KGO35909

Cytochrome P450, E-class, group I

 

PEXP_032030

KGO39788

Hypothetical protein

 

PEXP_089350

KGO41723

Transcription factor, fungi

 

PEXP_005230

KGO36724

Transcription factor, fungi

 

PEXP_057180

KGO44225

ATP adenylyltransferase, C-terminal

 

PEXP_002560

KGO37249

Hypothetical protein

 

PEXP_081210

KGO47322

ATP-grasp fold, subdomain 1

 

PEXP_071070

KGO40603

Molybdenum cofactor synthesis C-terminal

 

PEXP_095390

KGO43637

Transcription factor, fungi

 

PEXP_054870

KGO44003

Transcription factor, fungi

 

PEXP_042700

KGO39429

Hypothetical protein

 

PEXP_036990

KGO35911

Ureohydrolase

 

PEXP_041200

KGO48300

Transcription factor, fungi

 

PEXP_050270

KGO42077

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

 

PEXP_048130

KGO39637

Transcription factor, fungi

 

PEXP_010010

KGO48952

Transcription factor, fungi

 

PEXP_085290

KGO41166

Transcription factor, fungi

 

PEXP_079380

KGO37922

Zinc finger, C2H2

 

PEXP_057190

KGO44226

Thiamine pyrophosphate enzyme, C-terminal TPP-binding

 

PEXP_069040

KGO46734

Cytochrome P450

 

PEXP_007560

KGO36956

Zinc finger, C2H2

 

PEXP_081220

KGO47323

Transcription factor, fungi

 

PEXP_087170

KGO40934

Transcription factor, fungi

 

PEXP_105830

KGO41509

Transcription factor, fungi

 

PEXP_043140

KGO39473

Cytochrome P450

 

PEXP_067370

KGO46568

hypothetical protein

 

PEXP_073070

KGO48577

Exonuclease, RNase T/DNA polymerase III

 

PEXP_051020

KGO42152

Amidohydrolase 1

 

PEXP_061400

KGO45512

Hypothetical protein

 

PEXP_101010

KGO38143

Glycoside hydrolase, family 71

 

PEXP_043150

KGO39474

Terpenoid synthase

 

PEXP_015320

KGO47645

ATP-grasp fold, subdomain 1

Pectate lyase activity

PEXP_101160

KGO38158

Pectin lyase fold/virulence factor

 

PEXP_080220

KGO38006

Pectate lyase, catalytic

Calcium ion transmembrane transporter activity

PEXP_046990

KGO39741

Sodium/calcium exchanger membrane region

PEXP_088420

KGO41618

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

PEXP_095400

KGO43638

Sodium/calcium exchanger membrane region

 

PEXP_050270

KGO42077

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

Sequence-specific DNA binding RNA polymerase II transcription factor activity

PEXP_102680

KGO36423

Transcription factor, fungi

PEXP_042010

KGO48399

Protein of unknown function DUF3468

PEXP_095680

KGO43666

Protein of unknown function DUF3468

PEXP_040610

KGO48229

Transcription factor, fungi

PEXP_070870

KGO40583

Aldehyde dehydrogenase, C-terminal

PEXP_021500

KGO44639

Transcription factor, fungi

PEXP_102420

KGO36222

Protein of unknown function DUF3468

 

PEXP_088350

KGO41611

Transcription factor, fungi

 

PEXP_099120

KGO46300

Hypothetical protein

 

PEXP_085230

KGO41160

Hypothetical protein

 

PEXP_080790

KGO38063

Hypothetical protein

 

PEXP_102160

KGO38273

Casein kinase II, regulatory subunit

 

PEXP_032030

KGO39788

Hypothetical protein

 

PEXP_005230

KGO36724

Transcription factor, fungi

 

PEXP_057180

KGO44225

ATP adenylyltransferase, C-terminal

 

PEXP_002560

KGO37249

Hypothetical protein

 

PEXP_095390

KGO43637

Transcription factor, fungi

 

PEXP_042700

KGO39429

Hypothetical protein

 

PEXP_048130

KGO39637

Transcription factor, fungi

 

PEXP_010010

KGO48952

Transcription factor, fungi

 

PEXP_085290

KGO41166

Transcription factor, fungi

 

PEXP_087170

KGO40934

Transcription factor, fungi

 

PEXP_067370

KGO46568

Hypothetical protein

 

PEXP_101010

KGO38143

Glycoside hydrolase, family 71

Hydrolase activity, hydrolyzing O-glycosyl compounds

PEXP_000940

KGO44403

Protein of unknown function DUF2985

PEXP_044190

KGO39338

Aldolase-type TIM barrel

PEXP_049330

KGO39518

Glycoside hydrolase, family 35

 

PEXP_023030

KGO42774

Glycoside hydrolase, superfamily

 

PEXP_101680

KGO38226

Concanavalin A-like lectin/glucanases superfamily

 

PEXP_023340

KGO42463

Glycoside hydrolase, family 43

 

PEXP_070780

KGO40574

Glycoside hydrolase, family 31

 

PEXP_072880

KGO48558

Glycoside hydrolase, superfamily

 

PEXP_048880

KGO39711

Concanavalin A-like lectin/glucanases superfamily

 

PEXP_069330

KGO46763

Glycoside hydrolase, family 61

 

PEXP_011880

KGO49139

Glycoside hydrolase, family 28

 

PEXP_089320

KGO41720

Glycoside hydrolase, superfamily

 

PEXP_076310

KGO37551

Glycoside hydrolase, family 32

 

PEXP_026640

KGO42915

Glycoside hydrolase, family 16, CRH1, predicted

 

PEXP_057570

KGO44264

Glycoside hydrolase family 3

 

PEXP_053240

KGO42372

Glycoside hydrolase, family 61

 

PEXP_042140

KGO48412

Concanavalin A-like lectin/glucanase, subgroup

 

PEXP_107940

KGO41788

Alpha-amylase, C-terminal all beta

ATPase activity, coupled to transmembrane movement of substances

PEXP_023060

KGO42777

CDR ABC transporter

PEXP_050880

KGO42138

ABC transporter, integral membrane type 1

PEXP_110420

KGO38764

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

PEXP_040720

KGO48240

ABC transporter, integral membrane type 1

PEXP_071990

KGO40700

ABC transporter, integral membrane type 1

PEXP_088420

KGO41618

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

 

PEXP_104880

KGO41412

ABC transporter, integral membrane type 1

 

PEXP_050270

KGO42077

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

 

PEXP_077310

KGO37715

CDR ABC transporter

 

PEXP_086490

KGO40844

ABC transporter, integral membrane type 1

 

PEXP_057530

KGO44260

ABC transporter, integral membrane type 1

4-Hydroxyphenylpyruvate dioxygenase activity

PEXP_084560

KGO41093

4-Hydroxyphenylpyruvate dioxygenase

PEXP_008360

KGO37036

4-Hydroxyphenylpyruvate dioxygenase

Integral component of membrane

PEXP_046990

KGO39741

Sodium/calcium exchanger membrane region

PEXP_024890

KGO42618

Major facilitator superfamily domain, general substrate transporter

PEXP_041670

KGO48366

Major facilitator superfamily domain, general substrate transporter

 

PEXP_059490

KGO45335

Sulfate anion transporter

 

PEXP_043720

KGO39291

Alkali metal cation/H+ antiporter Nha1, C-terminal

 

PEXP_052330

KGO42281

Major facilitator superfamily domain, general substrate transporter

 

PEXP_037770

KGO36126

Major facilitator superfamily domain, general substrate transporter

 

PEXP_102860

KGO36441

Mitochondrial carrier protein

 

PEXP_023060

KGO42777

CDR ABC transporter

 

PEXP_033600

KGO39977

Amino acid/polyamine transporter I

 

PEXP_014370

KGO47550

Amino acid transporter, transmembrane

 

PEXP_094860

KGO43584

Major facilitator superfamily domain, general substrate transporter

 

PEXP_006100

KGO36811

Major facilitator superfamily domain, general substrate transporter

 

PEXP_046430

KGO39169

Major facilitator superfamily domain, general substrate transporter

 

PEXP_086200

KGO40808

Amino acid/polyamine transporter I

 

PEXP_024440

KGO42573

Major facilitator superfamily domain, general substrate transporter

 

PEXP_003610

KGO37353

Major facilitator superfamily domain, general substrate transporter

 

PEXP_043410

KGO39260

Major facilitator superfamily domain, general substrate transporter

 

PEXP_048620

KGO39686

Nickel/cobalt transporter, high-affinity

 

PEXP_006360

KGO36837

Major facilitator superfamily domain, general substrate transporter

 

PEXP_044620

KGO39381

Tetracycline resistance protein, TetA/multidrug resistance protein MdtG

 

PEXP_072400

KGO48510

Major facilitator superfamily domain, general substrate transporter

 

PEXP_028370

KGO43119

Amino acid transporter, transmembrane

 

PEXP_009920

KGO48943

Peroxisomal biogenesis factor 11

 

PEXP_033410

KGO39958

Major facilitator superfamily domain, general substrate transporter

 

PEXP_050880

KGO42138

ABC transporter, integral membrane type 1

 

PEXP_056980

KGO44205

Major facilitator superfamily domain, general substrate transporter

 

PEXP_102420

KGO36222

Protein of unknown function DUF3468

 

PEXP_074410

KGO48711

Major facilitator superfamily domain, general substrate transporter

 

PEXP_068910

KGO46721

Major facilitator superfamily domain, general substrate transporter

 

PEXP_060610

KGO45433

Major facilitator superfamily domain, general substrate transporter

 

PEXP_009670

KGO49300

Cation/H+ exchanger

 

PEXP_017290

KGO46087

Major facilitator superfamily domain, general substrate transporter

 

PEXP_110420

KGO38764

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

 

PEXP_059360

KGO45322

Mitochondrial carrier protein

 

PEXP_095790

KGO43677

Major facilitator superfamily domain, general substrate transporter

 

PEXP_040720

KGO48240

ABC transporter, integral membrane type 1

 

PEXP_071990

KGO40700

ABC transporter, integral membrane type 1

 

PEXP_048590

KGO39683

Amino acid/polyamine transporter I

 

PEXP_104220

KGO36561

Cation/H+ exchanger

 

PEXP_000120

KGO44321

Major facilitator superfamily domain, general substrate transporter

 

PEXP_019490

KGO45826

C4-dicarboxylate transporter/malic acid transport protein

 

PEXP_088420

KGO41618

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

 

PEXP_076320

KGO37552

Major facilitator superfamily domain, general substrate transporter

 

PEXP_001370

KGO37112

Major facilitator superfamily domain, general substrate transporter

 

PEXP_001360

KGO37111

Major facilitator superfamily domain, general substrate transporter

 

PEXP_104880

KGO41412

ABC transporter, integral membrane type 1

 

PEXP_005240

KGO36725

Major facilitator superfamily domain, general substrate transporter

 

PEXP_108540

KGO41848

Major facilitator superfamily domain, general substrate transporter

 

PEXP_095400

KGO43638

Sodium/calcium exchanger membrane region

 

PEXP_046610

KGO39187

Sodium/calcium exchanger membrane region

 

PEXP_098820

KGO46270

Major facilitator superfamily domain, general substrate transporter

 

PEXP_001950

KGO37170

Mitochondrial carrier protein

 

PEXP_050270

KGO42077

ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter

 

PEXP_023180

KGO42789

Major facilitator superfamily domain, general substrate transporter

 

PEXP_010400

KGO48991

Major facilitator superfamily domain, general substrate transporter

 

PEXP_098540

KGO46242

Major facilitator superfamily domain, general substrate transporter

 

PEXP_066250

KGO46934

Major facilitator superfamily domain, general substrate transporter

 

PEXP_062420

KGO45644

General substrate transporter

 

PEXP_026170

KGO42868

Major facilitator superfamily domain, general substrate transporter

 

PEXP_077310

KGO37715

CDR ABC transporter

 

PEXP_022750

KGO42746

Major facilitator superfamily domain, general substrate transporter

 

PEXP_068690

KGO46699

Major facilitator superfamily domain, general substrate transporter

 

PEXP_066860

KGO46517

Major facilitator superfamily domain, general substrate transporter

 

PEXP_086490

KGO40844

ABC transporter, integral membrane type 1

 

PEXP_067360

KGO46567

Major facilitator superfamily domain, general substrate transporter

 

PEXP_057530

KGO44260

ABC transporter, integral membrane type 1

 

PEXP_034320

KGO40048

Arsenical pump membrane protein, ArsB

 

PEXP_074940

KGO36159

Major facilitator superfamily domain, general substrate transporter