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Table 2 Common CAG- and GeAG-enriched GO terms

From: Comparative transcriptome analysis revealing dormant conidia and germination associated genes in Aspergillus species: an essential role for AtfA in conidial dormancy

    Count (changed: not changed)
  GO terms A. fumigatus A. niger A. oryzae Over (+)/under (−)
CAG-enriched
# C — Cellular component
  GO:0009514 glyoxysome 13:24 10:28 15:21 +
GeAG-enriched
# C — Cellular component
  GO:0005730 nucleolus 113:56 119:40 106:50 +
  GO:0030686 90S preribosome 37:0 34:1 33:1 +
  GO:0005829 cytosol 243:1105 333:986 225:1050 +
  GO:0032040 small-subunit processome 32:2 35:0 33:2 +
  GO:0005840 ribosome 44:22 57:16 44:21 +
  GO:0005762 mitochondrial large ribosomal subunit 26:4 30:0 21:4 +
  GO:0030687 preribosome, large subunit precursor 24:3 20:1 17:4 +
  GO:0005739 mitochondrion 71:304 95:297 57:315 +
  GO:0009986 cell surface 21:51 29:46 25:52 +
  GO:0031966 mitochondrial membrane 12:13 14:13 11:11 +
  GO:0005886 plasma membrane 42:224 73:191 43:214 +
  GO:0005634 nucleus 154:1289 238:1331 140:1322 +
  GO:0005819 spindle 8:13 10:12 7:13 +
  GO:0016021 integral component of membrane 15:555 36:695 17:780 -
# F — Molecular function
  GO:0003735 structural constituent of ribosome 110:18 126:3 95:9 +
  GO:0003723 RNA binding 44:83 57:55 42:64 +
  GO:0008026 ATP-dependent helicase activity 14:25 19:22 12:27 +
  GO:0003743 translation initiation factor activity 12:16 23:6 15:12 +
  GO:0051082 unfolded protein binding 14:30 21:25 13:28 +
  GO:0005524 ATP binding 69:439 102:475 64:506 +
  GO:0003676 nucleic acid binding 51:286 76:236 49:227 +
  GO:0005525 GTP binding 18:75 24:68 21:81 +
  GO:0000166 nucleotide binding 35:208 53:208 36:244 +
  GO:0016491 oxidoreductase activity 8:391 20:634 12:635 -
  GO:0000981 sequence-specific DNA binding RNA polymerase II transcription factor activity 2:238 12:326 2:248 -
# P — Biological process
  GO:0006412 translation 86:14 97:3 72:11 +
  GO:0006364 rRNA processing 26:7 24:4 23:9 +
  GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 20:2 21:1 19:2 +
  GO:0000027 ribosomal large subunit assembly 18:4 19:1 17:3 +
  GO:0035690 cellular response to drug 34:151 49:135 37:157 +
  GO:0006696 ergosterol biosynthetic process 10:16 11:15 8:19 +
  GO:0006413 translational initiation 9:12 17:5 11:9 +
  GO:0009060 aerobic respiration 9:18 12:11 9:16 +
  GO:0008152 metabolic process 9:324 16:468 6:513 -
  GO:0055085 transmembrane transport 16:405 21:552 16:651 -