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Table 3 A list of common CAGs (Ratio > 10)

From: Comparative transcriptome analysis revealing dormant conidia and germination associated genes in Aspergillus species: an essential role for AtfA in conidial dormancy

    FPKM ratio of conidia to hyphae*1    
A. fumigatus A. niger A. oryzae A. fumigatus A. niger A. oryzae atfA-dependency *2 Gene name in Af Annotation in A. fumigatus
Afu2g00200 An12g10720 AO090113000153 - 458.5 - full cat3 Catalase, putative
Afu8g01530 An12g10710 AO090113000154 1751.2 1334.9 2307.7 n.d. - HHE domain protein
Afu1g01490 An15g07300 AO090102000259 1291.8 1040.6 467.4 n.d. - Hypothetical protein
Afu2g14330 An17g01885 AO090009000665 1014.6 238.2 780.3 n.d. - Hypothetical protein
Afu6g03210 An12g10240 AO090011000656 798.1 439.3 1367.5 full conJ Conidiation-specific protein 10
Afu8g05810 An15g04670 AO090005000570 584.1 1287.1 28.3 n.d. - DUF1295 domain protein
Afu5g10160 An14g04530 AO090010000533 560.4 133.2 22.4 n.d. - ActVA 4 protein
Afu8g00600 An03g00920 AO090010000696 525.8 - - n.d. - Conserved hypothetical protein
Afu3g01210 An01g10950 AO090026000081 454.0 867.9 583.9 n.d. - ThiJ/PfpI family protein
Afu5g01160 An03g02190 AO090020000259 338.5 21.7 12.7 full - Monosaccharide transporter
Afu8g06020 An15g04770 AO090005000539 275.9 74.8 297.8 full - Glutamate decarboxylase
Afu6g03890 An09g03130 AO090701000158 249.3 350.6 194.9 full catA Catalase A
Afu1g03580 An18g04120 AO090009000418 196.6 288.5 629.2 n.d. - Hypothetical protein
Afu3g00640 An11g08160 AO090009000116 165.1 189.5 25.2 n.d. - Peptidoglycan binding domain protein
Afu2g01590 An03g04860 AO090701000790 125.5 22.0 74.4 full nce102 Non-classical export protein (Nce2), putative
Afu2g15740 An15g05990 AO090012000251 103.7 261.2 - full - Oxidoreductase, short chaindehydrogenase/reductase family
Afu5g03930 An09g06270 AO090102000598 100.6 220.2 70.0 partial - Alcohol dehydrogenase, putative
Afu1g13530 An08g06600 AO090012000522 100.5 74.2 35.6 n.d. - Hypothetical protein
Afu3g03940 An01g00280 AO090124000046 91.1 24.5 47.6 full - 2,3-diketo-5-methylthio-1-phosphopentanephosphatase, putative
Afu3g11550 An02g07350 AO090003000710 88.6 42.0 360.8 n.d. - LEA domain protein
Afu5g03269 An09g05520 AO090102000529 88.6 54.5 72.9 n.d. - Unknown
Afu6g08320 An11g01750 AO090003000094 87.1 81.9 134.4 n.d. pilB Putative conserved eisosome component
Afu3g12760 An02g08740 AO090012000846 81.3 85.1 268.0 n.d. - Hypothetical protein
Afu4g03390 An14g02450 AO090011000203 79.2 15.6 21.0 full - Aquaporin
Afu5g13100 An14g06050 AO090120000435 77.1 16.0 78.7 n.d. - Hypothetical protein
Afu6g13470 An08g03030 AO090020000658 60.5 - 496.2 n.d. - Conserved hypothetical protein
Afu1g13550 An08g06620 AO090012000521 45.4 97.8 113.2 n.d. - Hypothetical protein
Afu5g14310 An09g01150 AO090020000287 43.8 137.2 13.0 not CAG - Short chain dehydrogenase/reductase familyprotein
Afu3g10480 An16g04420 AO090003000594 31.5 76.5 134.2 n.d. - Conserved hypothetical protein
Afu6g08730 An11g06120 AO090001000547 30.2 49.1 699.1 not CAG - 6-phosphogluconate dehydrogenase,decarboxylating
Afu4g09250 An04g04280 AO090023000611 29.7 11.6 18.2 n.d. - Hypothetical protein
Afu4g05900 An04g00100 AO090023001009 25.1 35.1 24.7 n.d. - Conserved hypothetical protein
Afu4g01020 An18g01860 AO090003001579 24.1 28.6 99.1 n.d. fhk1 Sensor histidine kinase/response regulator, putative
Afu6g13860 An08g08500 AO090103000362 23.9 370.9 429.6 n.d. - Conserved hypothetical protein
Afu5g09180 An07g03930 AO090020000514 23.7 671.7 448.4 n.d. - Hypothetical protein
Afu4g10860 An04g05790 AO090003001124 23.2 22.7 24.9 n.d. vosA Velvet family protein
Afu5g01290 An14g07380 AO090010000635 22.4 680.6 42.7 partial - Oxidoreductase, zinc-binding dehydrogenasefamily, putative
Afu1g03090 An01g05320 AO090005000810 21.7 17.9 16.1 n.d. - Conserved hypothetical protein
Afu2g04200 An11g02200 AO090003000208 20.8 16.6 37.7 not CAG hppD 4-hydroxyphenylpyruvate dioxygenase
Afu7g01430 An12g01460 AO090010000221 16.5 109.6 37.5 full - Opsin 1
Afu2g16930 An04g09030 AO090102000125 14.8 33.2 103.7 not CAG - Succinate:fumarate antiporter (Acr1), putative
Afu2g10020 An16g05030 AO090011000634 10.1 1755.9 87.7 n.d. - Hypothetical protein
Afu2g02310 An07g06530 AO090011000512 10.0 19.7 71.1 not CAG sur7 sur7 protein, putative
  1. *1: “-”, not expressed in hyphae
  2. *2: AtfA-dependency is clarified by real-time RT PCR. n.d., not determined