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Fig. 3 | BMC Genomics

Fig. 3

From: Nosocomial transmission of Clostridium difficile ribotype 027 in a Chinese hospital, 2012–2014, traced by whole genome sequencing

Fig. 3

a Phylogenetic tree of 22 isolates from this study and two reference strains R20291 (ST1) and M68 (ST37) reconstructed by BEAST based on the multi-mapping results of REALPHY. The strain ID is coordinate to patient ID. b SNP pattern and relationship of NAP1/BI/027 isolates. Thirteen isolates from 11 cases (13A, 13B, and 13C were all from patient 13) are clustered using NAP1/BI/027 strain R20291 as the outgroup. The light blue squares represent mutations compared to R20291

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BMC Genomics

ISSN: 1471-2164

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