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Table 2 Gene ontology (GO) enrichment of consensus ROH analysisa

From: Genomic analysis of Ugandan and Rwandan chicken ecotypes using a 600 k genotyping array

GO: ID

Go: term

GO:0006915

Apoptotic process

GO:0002209

Behavioral defense response

GO:0001662

Behavioral fear response

GO:0070588

Calcium ion transmembrane transport

GO:0071345

Cellular response to cytokine stimulus

GO:0071495

Cellular response to endogenous stimulus

GO:0071396

Cellular response to lipid

GO:0033554

Cellular response to stress

GO:0019221

Cytokine-mediated signaling pathway

GO:0006281

DNA repair

GO:0007631

Feeding behavior

GO:0007599

Hemostasis

GO:0031663

Lipopolysaccharide-mediated signaling pathway

GO:0032873

Negative regulation of stress-activated MAPK cascade

GO:0070303

Negative regulation of stress-activated protein kinase signaling cascade

GO:0016310

Phosphorylation

GO:0042981

Regulation of apoptotic process

GO:0080135

Regulation of cellular response to stress

GO:0001959

Regulation of cytokine-mediated signaling pathway

GO:0043408

Regulation of MAPK cascade

GO:2000377

Regulation of reactive oxygen species metabolic process

GO:0080134

Regulation of response to stress

GO:0032319

Regulation of rho gtpase activity

GO:1901700

Response to oxygen-containing compound

GO:0009314

Response to radiation

GO:0006950

Response to stress

GO:0023014

Signal transduction by phosphorylation

GO:0033209

Tumor necrosis factor-mediated signaling pathway

GO:0042060

Wound healing

GO:0003684

Damaged DNA binding

GO:0005246

Calcium channel regulator activity

GO:0005488

Binding

GO:0008289

Lipid binding

GO:0030234

Enzyme regulator activity

GO:0005509

Calcium ion binding

GO:1901363

Heterocyclic compound binding

GO:0005160

Transforming growth factor beta receptor binding

GO:0005543

Phospholipid binding

GO:0004674

Protein serine/threonine kinase activity

GO:0035258

Steroid hormone receptor binding

GO:0008083

Growth factor activity

  1. Subset of GO terms that could putatively affect responses to environmental stressors. aAll terms were statistically significant at FDR < 0.15. This analysis lends evidence to support that all three populations experienced selective pressures for variants effecting stress response, immune response, and behavior