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Fig. 6 | BMC Genomics

Fig. 6

From: Genome-wide resequencing of KRICE_CORE reveals their potential for future breeding, as well as functional and evolutionary studies in the post-genomic era

Fig. 6

Regions of the associated signals near the Rc (a) and Wx (b) regions. The top of each panel shows the ROD for a 1-Mb window around the peak SNPs. Negative log10P-values for each SNP from the linear or compressed mixed linear model are plotted. Blue or dark orange dashed horizontal lines indicate the genome-wide significance cutoff for the Rc and Wx regions, respectively. The bottom of each panel within the blue or red box denotes the range of SNPs over the cutoff. c Mean ROD values for 400 kb around the Rc and Wx regions. d LD decay plots of the regions compared to genome-wide LD decay. e and f LD blocks of 400 kb on each side of the association peak for the Rc (e) and Wx (f) regions

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BMC Genomics

ISSN: 1471-2164

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