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Fig. 2 | BMC Genomics

Fig. 2

From: Genomic analysis of nontypeable pneumococci causing invasive pneumococcal disease in South Africa, 2003–2013

Fig. 2

Maximum likelihood phylogenetic tree based on core genome SNPs of invasive nontypeable Streptococcus pneumoniae (n = 39), shown in red and yellow from South Africa (2003–2013). Encapsulated S. pneumoniae (representative of predicted ancestral serotypes) from South Africa (n = 42, shown in blue) and publically available nonencapsulated S. pneumoniae genomes ([20, 21] (n = 6, indicated green) were included for comparison

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