Table 3 Ranking of the top-ranked events according to EventPointer and their ranking positions in the other algorithms (EP: EventPointer, AA: AltAnalyze)
From: EventPointer: an effective identification of alternative splicing events using junction arrays
Gene | Event type | Genomic position | EP | AA | TAC |
|---|---|---|---|---|---|
MYCBP2 | Complex Event | 13:77673020-77695630 | 1 | 12 | 383 |
KIF23 | Cassette Exon | 15:69713986-69714774 | 2 | 11 | 3 |
AC024560.3 | Cassette Exon | 3:197348575-197350253 | 3 | 9 | 113 |
FBXO22 | Cassette Exon | 15:76196323-76205608 | 4 | 55 | 1392 |
SRSF3 | Complex Event | 6:36566626-36568967 | 5 | 2095 | 280 |
SUPT16H | Alternative Last Exon | 14:21837979-21852105 | 6 | NA | 1026 |
HMBOX1 | Alternative First Exon | 8:28902878-28904970 | 7 | 6 | 98 |
ACAD11 | Complex Event | 3:132297677-132298402 | 8 | 396 | 3371 |
NCOR1 | Cassette Exon | 17:16052765-16055312 | 9 | 365 | 5757 |
AUP1 | Retained Intron | 2:74754863-74755133 | 10 | NA | 10501 |