Fig. 5
From: Finishing monkeypox genomes from short reads: assembly analysis and a neural network method
A sequence which cannot be estimated correctly based on the shortest path [39]. a A reference sequence ("Ref"), positions 142075 to 142145, is from a published monkeypox genome (accession number: DQ011154). Sequences R1 to R5 were assumed as short fragments obtained experimentally. b An example of an overlapping graph in which each node represents an individual sequence (R1 to R5). An edge is added and its corresponding weight is the non-overlapping nucleotide count between any two overlapping sequences. c The path in red indicates that the sequence was assembled correctly. d The path in black indicates that the sequence was assembled incorrectly