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Table 1 Samples analyzed by NGS

From: A next generation sequencing-based method to study the intra-host genetic diversity of norovirus in patients with acute and chronic infection

Sample

NoV genotype

Sample collection Date

Patient description, age group

OU1

GII.4 Sydney 2012

January 2012

Outbreak patient (senior residence), 70-90Y

OU2

GII.4 Sydney 2012

September 2014

Outbreak patient (supportive living), > 70-90Y

OU3

GII.5

November 2013

Outbreak patient (hospital acute care), 30-50Y

OU4

GI.7

November 2012

Outbreak patient (senior residence), 70-90Y

SP1

GII.4 Den Haag 2006b

December 2012

Bone marrow transplant patient, < 18Y

SP2

GII.4 Den Haag 2006b

April 2013