Skip to main content

Table 3 Differential Expressed Gene (DEGs). Numbers of DEGs obtained by DESeq2 and successively filtered by SeqMonk. Common: common DEGs between DESeq2 and SeqMonk analysis

From: Transcriptome profiling of two olive cultivars in response to infection by the CoDiRO strain of Xylella fastidiosa subsp. pauca

 

deg LC

deg OG

deg OG LC Hty

STATISTIC

LC XInf vs LC Hty

OG XInf vs OG Hty

LC Hty vs OG Hty

DESeq2

4165

5851

951

SeqMonk

407

293

186

common

348

240

86

upreg

38

56

–

downreg

310

184

–

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us