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Table 2 Numbers of BLAST hits for genes implicated in bacterial cold shock response in all strains used in this study

From: Genomic mechanisms for cold tolerance and production of exopolysaccharides in the Arctic cyanobacterium Phormidesmis priestleyi BC1401

Gene Number of BLAST hits
Phormidesmis priestleyi BC1401 Leptolyngbya boryana PCC 6306 Oscillatoriales cyanobacterium JSC12 Geitlerinema sp. PCC7407
aceE 1 2 2 1
aceF 1 2 1 1
csp-family 1 1 0 1
deaD 1 1 1 1
desAB 2 2 1 2
dnaA 1 1 1 1
gyrA 2 2 2 2
dnaK a 5 5 6 4
dnaJ a 1 1 1 1
hupB 4 3 3 1
infA/IF-1 1 1 1 1
infB/IF-2 1 1 1 1
infC/IF-3 1 1 2 2
nusA 1 1 1 1
otsA 0 0 0 1
pnp 1 1 1 1
rnr 1 1 1 1
rbfA 1 1 1 1
recA 1 1 1 1
tig 1 1 1 1
yfiA 1 0 1 1
Total 29 29 29 27
  1. Compiled from Barria et al. [5] and Varin et al. [66]. Chaperones also involved in heat shock are marked with a