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Table 1 Number of DE genes from sex chromosomes detected by each method in the HapMap-CEU data set at FDR-ajusted p-value of 0.05

From: ABSSeq: a new RNA-Seq analysis method based on modelling absolute expression differences

Method Sex/Total Sex in Top 10
ABSSeq 7/7 7
DESeq 7/25 5
edgeR 7/20 7
DESeq2 7/10 7
Voom 7/7 7
baySeq 9/27 7
EBSeq 2/38 2