Table 1 The top five significant miRNAs correlated to phenotypes in both Duroc and PiNN pigs
Phenotype | Top five significant miRNAs | P-value | |Correlation| |
|---|---|---|---|
STO | miR-130, miR-208, miR-363, miR-24, miR-126 | 3.123E-04–1.195E-03 | 0.803–0.753 |
FTO | miR-22, miR-166, miR-1892, miR-1343, miR-143 | 1.222E-03–4.514E-03 | 0.752–0.689 |
FTG | miR-99, miR-499, let-7, miR-181, miR-154 | 1.577E-04–3.337E-04 | 0.824–0.801 |
State3_pyruvate | miR-30, miR-196, miR-190, miR-363, miR-95 | 1.508E-03–7.169E-03 | 0.661–0.581 |
State3_succinate | miR-126, miR-196, miR-363, miR-1892, miR-30 | 7.329E-04–4.205E-03 | 0.691–0.611 |
State4_CAT | miR-196, miR-2012, miR-192, miR-202, miR-17 | 2.484E-04–1.360E-02 | 0.731–0.542 |
RCI_pyruvate | miR-17, miR-182, miR-203, miR-27, miR-378 | 6.558E-03–1.258E-02 | 0.587–0.547 |
RCI_succinate | miR-182, miR-203, miR-17, miR-27, miR-542 | 3.630E-04–4.034E-03 | 0.718–0.613 |
GP | miR-148, let-7, miR-194, miR-7, miR-25 | 3.063E-03–1.477E-02 | 0.627–0.536 |
PFK | miR-130, miR-208, miR-193, miR-32, miR-24 | 5.944E-04–1.455E-03 | 0.700–0.663 |
LDH | miR-17, miR-58, miR-15, miR-769, miR-345 | 1.090E-04–4.384E-03 | 0.758–0.609 |
CS | miR-338, miR-30, miR-17, miR-182, miR-455 | 3.970E-05–1.959E-03 | 0.786–0.649 |
ComplexI | miR-182, miR-181, miR-143, miR-28, miR-765 | 2.691E-04–1.620E-03 | 0.743–0.672 |
ComplexII | miR-182, miR-1, miR-1307, miR-203, miR-499 | 2.557E-03–2.458E-02 | 0.666–0.527 |
ComplexIV | miR-196, let-7, miR-451, miR-128, miR-99 | 3.668E-03–7.785E-03 | 0.618–0.577 |
IMP | miR-168, miR-166, miR-58, miR-223, let-7 | 3.908E-04–1.382E-02 | 0.745–0.569 |
AMP | miR-10, miR-126, let-7, miR-27, miR-450 | 9.860E-05–5.804E-04 | 0.789–0.730 |
ADP | miR-15, miR-885, miR-322, miR-450, miR-338 | 1.316E-04–4.540E-03 | 0.781–0.636 |
ATP | miR-15, miR-450, miR-210, miR-885, miR-451 | 4.811E-04–9.562E-03 | 0.737–0.593 |