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Table 2 Substage-concordant and negatively concordant genes

From: Regulatory complexity revealed by integrated cytological and RNA-seq analyses of meiotic substages in mouse spermatocytes

Substage Number of genes Number of genes
concordant negatively concordant
Spermatogoniaa 1235 1694
Preleptonema 55 12
Early Leptonema 92 49
Late Leptonema/Zygonema 742 556
Late Leptonema/Zygonema/Early Pachynema 131 159
Early Pachynema 922 1068
Early Pachynema/Late Pachynema/Diplonema 106 221
Late Pachynema/Diplonema 4004 4366
  1. aSpermatogonia are a separate mitotic stage, not a meiotic substage