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Table 1 Genes with significant genotype by environment interaction

From: Canalization of gene expression is a major signature of regulatory cold adaptation in temperate Drosophila melanogaster

Gene Significance of interaction FDR(BH) L2FC rec15 vs. RT Europe L2FC rec15 vs. RT Africa L2FC rec90 vs. RT Europe L2FC rec90 vs. RT Africa
HR38 4.04E-02a −0.21 0.59 3.10 3.24
CG44247 4.05E-02a −0.26 0.24 0.41 0.55
GATAe 9.71E-04 −0.11 −0.61 −0.36 −1.63
CG13607 1.06E-03 −0.40 −0.72 −0.83 −2.67
CG11897 1.09E-03 −0.06 −0.35 −0.10 −0.69
CG11741 1.99E-02 −0.74 −1.03 −0.62 −1.86
cwo 1.41E-02 −0.17 −0.44 0.81 0.04
rudimentary 1.63E-02 0.07 −0.31 0.08 −0.44
wunen 7.82E-06 0.04 0.18 0.49 1.14
brummer 1.33E-04 −0.19 0.15 0.39 1.26
CG18744 4.51E-04 0.43 1.29 0.93 2.29
CG7017 1.73E-03 −0.25 0.41 0.93 3.75
Lnk 3.24E-03 −0.04 0.12 0.14 0.69
CG15126 1.12E-02 0.17 0.48 0.86 1.66
CG13482 1.99E-02 0.70 1.25 1.22 2.55
GstE8 4.96E-02 0.11 0.50 0.49 1.42
  1. Significance of interaction applies to rec90 vs. RT except noted otherwise
  2. Bold L2FC values indicate greater absolute L2FC for the African population
  3. aInteraction is significant for rec15 vs. RT