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Fig. 2 | BMC Genomics

Fig. 2

From: Lipopolysaccharide treatment induces genome-wide pre-mRNA splicing pattern changes in mouse bone marrow stromal stem cells

Fig. 2

Sashimi plots of four types of AS events. Sashimi plots of four types of AS events were shown, including cassette exon, intron retention, alternative 5′ and 3′ splice site. The red plots represent the LPS treated condition, and the blue ones represent controls. The X-axes indicate genomic locations, and the Y-axes indicate transcription intensity. In each plot, a “sashimi-like” region indicates a heavily transcribed region, in this case, exonic region. The blank regions between exonic regions indicate intronic regions. The “bridges” crossing exons indicate junction reads. The numbers of junction reads are shown on the “bridges”. The exonic structure of each AS event is shown below each Sashimi plot. On the right it displays the estimated Ψ (red line) value and the full posterior distribution (black bars)

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