Skip to main content

Advertisement

Table 1 Alternatively spliced genes containing known protein domains

From: Lipopolysaccharide treatment induces genome-wide pre-mRNA splicing pattern changes in mouse bone marrow stromal stem cells

Gene Symbol AS Type Pfam Domain Domain Description
Ttc13 cassete exon TPR_11 TPR repeat
Rabep1 cassete exon Rabaptin Rabaptin
Camk1d cassete exon Pkinase Protein kinase domain
Nr1h2 alternative 5′ splice site Hormone_recep Ligand-binding domain of nuclear hormone receptor
Adarb1 alternative 5′ splice site A_deamin Adenosine-deaminase (editase) domain
Scoc alternative 3′ splice site DUF2205 Predicted coiled-coil protein
Ppip5k2 alternative 3′ splice site His_Phos_2 Histidine phosphatase superfamily (branch 2)