|
Assembly quality parameters
| |
|---|
|
Total raw reads
|
272,121,520
|
|
Total clean reads
|
266,750,156
|
|
Clean bases
|
33.36G
|
|
Transcripts generated
|
84,085
|
|
No. unigenes > 200 bp
|
52,898
|
|
No. unigenes > 500 bp
|
23,072
|
|
Maximum length
|
15,697
|
|
Minimum length
|
201
|
|
Average unigene length
|
839
|
|
N50 valuea
|
1569
|
|
N90 valueb
|
305
|
|
Total nucleotides of unigenes
|
44,360,298
|
-
a N50, 50 % of the assembled bases were incorporated into sequences with length of N50 or longer
-
b N90, 90 % of the assembled bases were incorporated into sequences with length of N90 or longer
