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Table 2 Summary of assembly quality for flixweed RNA-seq

From: Target-site and non-target-site based resistance to the herbicide tribenuron-methyl in flixweed (Descurainia sophia L.)

Assembly quality parameters

 

Total raw reads

272,121,520

Total clean reads

266,750,156

Clean bases

33.36G

Transcripts generated

84,085

No. unigenes > 200 bp

52,898

No. unigenes > 500 bp

23,072

Maximum length

15,697

Minimum length

201

Average unigene length

839

N50 valuea

1569

N90 valueb

305

Total nucleotides of unigenes

44,360,298

  1. a N50, 50 % of the assembled bases were incorporated into sequences with length of N50 or longer
  2. b N90, 90 % of the assembled bases were incorporated into sequences with length of N90 or longer