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Fig. 4 | BMC Genomics

Fig. 4

From: The abundance of cis-acting loci leading to differential allele expression in F1 mice and their relationship to loci harboring genes affecting complex traits

Fig. 4

Comparison of DAE QTLs of B6/DBAF1 mice with autosomal cis-eQTLs of BxD RI mice. (a) forebrain and (b) kidney. BXD RNA-Seq data (green boxes) showing (a) total number of detected genes, (b) total number of genes, at cis-eQTLs, (c) number of DAE assayable genes at cis-eQTLs, (d) number of genes, at cis-eQTLs, overlapping with DAE QTLs in F1 RNA-Seq, (e) number of genes, at cis-eQTLs, which were not confirmed as DAE QTLs. Data from DAE QTLs detected by B6/DBAF1 RNA-Seq (brown boxes) showing (a) total number of detected genes, (b) number of genes detected in BXD and F1 RNA-Seq, (c) number of DAE QTLs, (d) number of DAE QTLs, which were not detected as cis-eQTLs. The yellow box shows the number of genes identified in both cis-eQTLs and DAE QTL analyses. The degree of overlap between the two approaches is significant in both forebrain (p = 0.0003) and kidney (p = 0.001)

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