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Table 5 The number of RNA-protein interaction pairs in collected datasets

From: IPMiner: hidden ncRNA-protein interaction sequential pattern mining with stacked autoencoder for accurate computational prediction

Dataset # of # of RNAs # of Reference
  interaction pairs   proteins  
RPI1807 1807 1078 1807 [13]
RPI369 369 332 338 [14]
RPI2241 2241 842 2043 [14]
NPInter2.0 10412 4636 449 [38]
RPI13254 13254 4500 42 [37]
RPI488 243 25 247 This study
  1. RPI488 is lncRNA-protein interactions based on structure complexes, PI369, RPI2241, RPI1807 are RNA-protein interactions. NPInter2.0 and RPI13254 are ncRNA-protein interactions from non-structure-based source