IPMiner: hidden ncRNA-protein interaction sequential pattern mining with stacked autoencoder for accurate computational prediction

Table 5 The number of RNA-protein interaction pairs in collected datasets

Dataset	# of	# of RNAs	# of	Reference
	interaction pairs		proteins
RPI1807	1807	1078	1807	[13]
RPI369	369	332	338	[14]
RPI2241	2241	842	2043	[14]
NPInter2.0	10412	4636	449	[38]
RPI13254	13254	4500	42	[37]
RPI488	243	25	247	This study

RPI488 is lncRNA-protein interactions based on structure complexes, PI369, RPI2241, RPI1807 are RNA-protein interactions. NPInter2.0 and RPI13254 are ncRNA-protein interactions from non-structure-based source

ISSN: 1471-2164