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Table 7 Genes involved in major energy generating pathways with increased expression in the L-RFI rumen epithelium

From: Transcriptome profiling of the rumen epithelium of beef cattle differing in residual feed intake

Energy generating pathway

Gene symbol

Gene name

DE gene (D) and/or within turquoise module (T)

Glycolysis

GPI

Glucose-6-phosphate isomerase

T

PFKL

Phosphofructokinase, liver

T

ALDOA

Aldolase A, fructose-bisphosphate

T

GAPDH

Glyceraldehyde-3-phosphate dehydrogenase

T

TPI1

Triosephosphate isomerase 1

D, T

HK1

Hexokinase 1

D

PKM2

Pyruvate kinase M2

D

Tricarboxylic acid cycle

CS

Citrate synthase

T

SUCLG1

Succinate-CoA ligase, alpha subunit

T

ACO2

Aconitase 2, mitochondrial

T

SDHB

Succinate dehydrogenase complex, subunit B

T

DLAT

Dihydrolipoamide S-acetyltransferase

T

ACLY

ATP citrate lyase

T

Oxidative phosphorylation

ATP5D

ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit

T

COX7A2L

Cytochrome c oxidase subunit VIIa polypeptide 2 like

T

ATP5J2

ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2

T

NDUFA10

NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42 kDa

T

COX8A

Cytochrome c oxidase subunit VIIIA (ubiquitous)

D, T

ATP6V1F

ATPase, H+ transporting, lysosomal 14 kDa, V1 subunit F

T

PPA1

Pyrophosphatase (inorganic) 1

T

UQCRQ

Cytochrome b-c1 complex subunit 8

T

NDUFB10

NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22 kDa

T

NDUFS8

NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23 kDa (NADH-coenzyme Q reductase)

T

ATP6AP1

ATPase, H+ transporting, lysosomal accessory protein 1

D, T

ATP6V0D1

ATPase, H+ transporting, lysosomal 38 kDa, V0 subunit D1

D, T

ATP6V0E1

ATPase, H+ transporting, lysosomal 9 kDa, V0 subunit E1

T

COX10

Cytochrome c oxidase assembly protein

T

COX4I1

Cytochrome c oxidase subunit IV isoform 1

T

UQCRC1

Ubiquinol-cytochrome c reductase core protein I

T

ATP6V0A1

ATPase, H+ transporting, lysosomal V0 subunit A1

T

NDUFV1

NADH dehydrogenase (ubiquinone) flavoprotein 1, 51 kDa

T

PPA1

Pyrophosphatase (inorganic) 1

T

SDHB

Succinate dehydrogenase complex, subunit B, iron sulfur (Ip)

T