Table 2 General features of the machine annotation of F. poae 2516. These were compared to the features of the published annotation of F. graminearum PH-1 [35]
F. poae | F. graminearum | |||
|---|---|---|---|---|
Total | Core | Supernumerary | ||
Genome size (bp) | 46 309 701 | 38 129 297 | 8 180 404 | 37 958 956 |
GC% | 46.30 % | 46.00 % | 47.60 % | 48.20 % |
# of genes | 14 817 | 12 097 | 2 720 | 14 160 |
Mean gene density (per Mb) | 320 | 317 | 332 | 373 |
Median gene length (bp) | 1 391 | 1 406 | 1 309 | 1 257 |
Avg introns/gene | 1.82 | 1.88 | 1.57 | 1.72 |
Median intron length (bp) | 54 | 54 | 57 | 55 |