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Table 2 Summary data of reads in untreated strains (CK30) and citral-treated strains (T30) of P. digitatum mycelia transcriptomes

From: Transcriptional profiling analysis of Penicillium digitatum, the causal agent of citrus green mold, unravels an inhibited ergosterol biosynthesis pathway in response to citral

Parameters

CK30

T30

CK30 & T30

Total clean reads

25,722,906

27,714,798

-

Total clean nucleotides (nt)

2,315,067,540

2,494,331,820

 

Q20 percentage

97.61 %

97.45 %

 

N percentage

0.01 %

0.01 %

 

GC percentage

52.76 %

45.2 %

-

Total number of contigs

23,279

29,572

-

Mean length of contigs (nt)

612

471

-

The number of unigenes

17,877

20,711

-

Mean length of unigenes (nt)

859

688

-

The number of all-unigenes

-

-

16898

Mean length of unigenes

-

-

1017

Unigenes annotation against NR

14,235

Unigenes annotation against NT

14,555

Unigenes annotation against Swiss-Prot

8,584

Unigenes annotation against KEGG

8,714

Unigenes annotation against COG

5,832

Unigenes annotation against GO

9,158

Up-regulated genes

2,322

Down-regulated genes

4,033