Parameters | CK30 | T30 | CK30 & T30 |
---|---|---|---|
Total clean reads | 25,722,906 | 27,714,798 | - |
Total clean nucleotides (nt) | 2,315,067,540 | 2,494,331,820 | Â |
Q20 percentage | 97.61Â % | 97.45Â % | Â |
N percentage | 0.01Â % | 0.01Â % | Â |
GC percentage | 52.76Â % | 45.2Â % | - |
Total number of contigs | 23,279 | 29,572 | - |
Mean length of contigs (nt) | 612 | 471 | - |
The number of unigenes | 17,877 | 20,711 | - |
Mean length of unigenes (nt) | 859 | 688 | - |
The number of all-unigenes | - | - | 16898 |
Mean length of unigenes | - | - | 1017 |
Unigenes annotation against NR | 14,235 | ||
Unigenes annotation against NT | 14,555 | ||
Unigenes annotation against Swiss-Prot | 8,584 | ||
Unigenes annotation against KEGG | 8,714 | ||
Unigenes annotation against COG | 5,832 | ||
Unigenes annotation against GO | 9,158 | ||
Up-regulated genes | 2,322 | ||
Down-regulated genes | 4,033 |