Fig. 3
From: The influence of trematode parasite burden on gene expression in a mammalian host
Percentage of parasite reads in mouse raw read libraries and assemblies a Percentage of raw reads matching S. mansoni. Concordant matches are represented (BLASTN %ID >90 %; E–value = 10–12) b Possible non-target reads in assemblies. Assemblies were compared against mouse and S. mansoni transcriptomes to identify non-targets (BLASTN E–value: 10–6; Percentage identity ≥90 %). de novo assemblies (Trinity de novo, SOAPdenovo–Trans) contained more non-target reads compared to reference guided assemblies (Reference guided trinity, Cufflinks)