Pan- and Comparative Genomics of Acinetobacter baumannii | ||||||||||
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# | Organism (Strain) | Chromosome/Plasmid | Size (Mb) | GC% | Genes/Proteins | Genes Predicted | New Genes | New Families | Pan-Genome | Core-Genome |
1 | A. baumannii BJAB07104 | NC_021726.1/p1BJAB07104:NC_021727.1;p2BJAB07104:NC_021728.1 | 4. 0 | 38.95 | 3878/3754 | 3822 | 3822 | 3597 | 3597 | 3597 |
2 | A. baumannii MDR-TJ | NC_017847.1/pABTJ1:NC_017848.1;pABTJ2:NC_020524.1 | 4.153 | 39.07 | 4014/3890 | 3956 | 286 | 268 | 3862 | 3454 |
3 | A. baumannii MDR-ZJ06 | NC_017171.1/pMDR-ZJ06:NC_017172.1 | 4.011 | 39.04 | 3847/3711 | 3799 | 129 | 123 | 3984 | 3272 |
4 | A. baumann;ii TYTH-1 | NC_018706.1 | 3.957 | 39.00 | 3754/3628 | 3697 | 76 | 76 | 4057 | 3176 |
5 | A. baumannii AC30 | CP007577.1/pAC30a:CP007578.1;pAC30b:CP007579.1; pAC30c:CP007580.1 | 3.922 | 38.82 | 3729/3660 | 3733 | 155 | 147 | 4203 | 3145 |
6 | A. baumannii BJAB0715 | NC_021733.1/pBJAB0715:NC_021734.1 | 4.053 | 38.91 | 3897/3756 | 3845 | 377 | 359 | 4560 | 2940 |
7 | A. baumannii BJAB0868 | NC_021729.1/p1BJAB0868:NC_021730.1; p2BJAB0868:NC_021731.1;p3BJAB0868:NC_021732.1 | 4.005 | 38.93 | 3820/3689 | 3762 | 55 | 55 | 4610 | 2899 |
8 | A. baumannii ZW85-1 | NC_023028.1/ZW85p2:NC_023031.1;pAbNDM-1:NC_019985.2 | 3.925 | 39.20 | 3684/3553 | 3625 | 237 | 234 | 4836 | 2847 |
9 | A. baumannii AC29 | NZ_CP007535.2 | 3.851 | 39.00 | 3659/3581 | 3613 | 11 | 10 | 4842 | 2834 |
10 | A. baumannii AB031 | NZ_CP009256.1 | 3.803 | 39.20 | 3595/3472 | 3521 | 241 | 224 | 5060 | 2754 |
11 | A. baumannii AB030 | NZ_CP009257.1 | 4.335 | 39.00 | 4336/4155 | 4285 | 549 | 334 | 5387 | 2715 |
12 | A. baumannii Abh12 OA2 | NZ_CP009534.1 | 3.875 | 39.10 | 3674/3563 | 3609 | 74 | 73 | 5454 | 2700 |
13 | A. baumannii LAC-4 | NZ_CP007712.1/pABLAC1:NZ_CP007713.1;pABLAC2:NZ_CP007714.1 | 3.968 | 38.98 | 3821/3683 | 3768 | 194 | 194 | 5640 | 2645 |
14 | A. baumannii 6411 | NZ_CP010368.1/p6411-66.409Â kb:NZ_CP010903.1;p6411-89.111Â kb:NZ_CP010369.1;p6411-9.012Â kb:NZ_CP010370.2 | 4.061 | 38.75 | 3840/3686 | 3780 | 408 | 403 | 6038 | 2580 |
15 | A. baumannii 6200 | NZ_CP010397.1/p6200-114.848Â kb:NZ_CP010398.1;p6200-47.274Â kb:NZ_CP010399.1; p6200-9.327Â kb:NZ_CP010400.1 | 4.073 | 39.18 | 3876/3762 | 3823 | 193 | 193 | 6230 | 2541 |
16 | A. baumannii NCGM 237 | NZ_AP013357.1 | 4.021 | 39.10 | 3894/3783 | 3838 | 93 | 93 | 6319 | 2527 |
17 | A. baumannii IOMTU433 | NZ_AP014649.1/pIOMTU433:NZ_AP014650.1 | 4.190 | 39.11 | 3999/3894 | 3926 | 242 | 237 | 6553 | 2527 |
18 | A. baumannii A1 | NZ_CP010781.1/pA1-1:NZ_CP010782.1 | 3.917 | 39.28 | 3735/3634 | 3650 | 140 | 134 | 6684 | 2513 |
19 | A. baumannii AB5075-UW | NZ_CP008706.1/p1AB5075:NZ_CP008707.1/p2AB5075:NZ_CP008708.1; p3AB5075:NZ_CP008709.1 | 4.066 | 39.04 | 3929/3827 | 3867 | 89 | 70 | 6751 | 2511 |
20 | A. baumannii XH386 | NZ_CP010779.1/pAB386:NZ_CP010780.1 | 4.199 | 39.16 | 4062/3961 | 3991 | 27 | 27 | 6778 | 2511 |
21 | A. baumannii Ab04- MFF | NZ_CP012006.1/pAB04-1:NZ_CP012007.1/pAB04-2:NZ_CP012008.1 | 4.192 | 38.91 | 4067/3944 | 4009 | 84 | 82 | 6856 | 2505 |
22 | A. baumannii ACICU | NC_010611.1/pACICU1:NC_010605.1;pACICU2:NC_010606.1 | 3.996 | 38.90 | 3802/3613 | 3782 | 80 | 80 | 6927 | 2496 |
23 | A. baumannii AtCC MFF | NZ_CP012004.1/pAB3:NZ_CP012005.1 | 4.006 | 38.94 | 3797/3688 | 3729 | 145 | 143 | 7066 | 2485 |
24 | A. baumannii AB307-0294 | NC_011595.1 | 3.760 | 39.00 | 3511/3363 | 3467 | 67 | 67 | 7127 | 2482 |
25 | A.baumannii AB0057 | NC_011586.1/pAB0057:NC_011585.1 | 4.059 | 39.18 | 3890/3669 | 3879 | 104 | 101 | 7218 | 2473 |
26 | A. baumannii AYE | NC_010410.1/p1ABAYE:NC_010401.1; p2ABAYE:NC_010402.1; p3ABAYE:NC_010404.1; p4ABAYE:NC_010403.1 | 4.048 | 39.33 | 3878/3725 | 3795 | 54 | 48 | 7262 | 2473 |
27 | A. baumannii D1279779 | NC_020547.2/pD1279779:NC_020525.1 | 3.711 | 38.98 | 3523/3381 | 3473 | 88 | 87 | 7341 | 2459 |
28 | A. baumannii 1656-2 | NC_017162.1/ABKp1:NC_017163.1;ABKp2:NC_017164.1 | 4.023 | 39.08 | 3882/3733 | 3837 | 51 | 48 | 7385 | 2459 |
29 | A. baumannii TCDC-AB0715 | CP002522.2/p1ABTCDC0715;p2ABTCDC0715 | 4.218 | 38.89 | 4010/3956 | 4054 | 37 | 32 | 7408 | 2458 |
30 | A.baumannii ATCC 17978 | NC_009085.1/pAB1:NC_009083.1; pAB2:NC_009084.1 | 4.001 | 38.88 | 3469/3367 | 3951 | 212 | 210 | 7606 | 2445 |